Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AraC regulog to Salmonella enterica subsp. enterica serovar Typhi str. J185

Reference regulog properties
Source regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. J185
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 56 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. J185
Locus tag Position Score Sequence
Position: -99
Score: 6.9
Sequence: TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA
Locus tag: SentesTy_010100005095
SentesTy_010100005095 -99 6.9 TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araE
Ortholog function: Low-affinity L-arabinose transport system proton symport protein
Enterobacter sp. 638 Ent638_3294 -179 4.6 TATAAATTAAGTATTTA-(4)-TAAATGATGATTATTCA
-158 4.8 TAAATGATGATTATTCA-(4)-AAGTTTAAATTGGAATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03264 -159 7.5 CAGCAATATAGTCCATA-(4)-TGGCTTATCCTGCCTGA
-73 4.9 TGGCAGGAAAAAAATGA-(4)-AATCAGTAACGACTCTA
Salmonella typhimurium LT2 STM3016 -99 6.9 TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA
Position: -134
Score: 7.2
Sequence: TAGCATAATAATGAATA-(4)-AAGACGAATAAGGAATG
Locus tag: SentesTy_010100010537
SentesTy_010100010537 -134 7.2 TAGCATAATAATGAATA-(4)-AAGACGAATAAGGAATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: araJ
Ortholog function: Protein AraJ precursor
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01860 -310 4.4 GGACGGTAAAGGCGACA-(4)-TAAAACCGACATCAACA
Salmonella typhimurium LT2 STM0394 -134 7.1 TAGCATAATAATGAATA-(4)-AAGACGGATAAGGAATG