Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Zur regulog to Serratia proteamaculans 568

Reference regulog properties
Source regulog: Zur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Serratia proteamaculans 568
Orthologous TF(s) Spro_4457
Regulated genes 9
Built upon 65 sites [see more]
Predicted regulatory interactions in Serratia proteamaculans 568
Locus tag Position Score Sequence
Position: -185
Score: 5.8
Sequence: GTGATGTTATAATGTAACACTTA
Locus tag: Spro_1121
Spro_1121 -185 5.8 GTGATGTTATAATGTAACACTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuC2
Ortholog function: putative zinc ABC transporter, ATP-binding protein
Citrobacter koseri ATCC BAA-895 CKO_04054 -141 6.1 TTATTGTTATGTTATAACATTTT
Citrobacter koseri ATCC BAA-895 CKO_00951 -45 5.7 CATTTGTTATGTTATAACGTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03035 -108 6 TTATTGTTATGTTATAACATTAA
Enterobacter sp. 638 Ent638_3178 -140 5.9 TTAGTGTTATGTTATAACATTAT
Serratia proteamaculans 568 Spro_1121 -185 5.8 GTGATGTTATAATGTAACACTTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3756 -123 6.5 GATATGTTATAATATAACAATTA
Position: -36
Score: 6.2
Sequence: TTATTGTTATAGTATAACATTAC
Locus tag: Spro_1125
Spro_1125 -36 6.2 TTATTGTTATAGTATAACATTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmE2
Ortholog function: 50S ribosomal protein L31 paralog
Escherichia coli str. K-12 substr. MG1655 b0296 -34 5.6 TTATGGTTATGTTATAACATAAC
Salmonella typhimurium LT2 STM0469 -35 5.8 TTATTGTTATGTTATAACATAAT
Citrobacter koseri ATCC BAA-895 CKO_02696 -35 5.5 TTATTGTTACGTTATAACATAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00435 -35 5.5 TTATTGTTATGTTATAACGTAAT
Enterobacter sp. 638 Ent638_0934 -37 5.6 CTTTTGTTATGTTATAACAAAAC
Erwinia amylovora ATCC 49946 EAM_1015 -36 6 TTTTGGTTATATTATAACATATC
Yersinia pestis KIM y1048 -36 5.9 ATGATGTTACATTATAACATACT
Serratia proteamaculans 568 Spro_1125 -36 6.2 TTATTGTTATAGTATAACATTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1168 -31 6 GATATGTTATAACATAACAATTG
Proteus mirabilis HI4320 PMI3379 -38 6.5 ATATTGTTATATTATAACATTAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0036 -32 6.2 GTAATGTTATATTATTACAATTT
Position: -85
Score: 6
Sequence: TTATTGTTATGTTATAACATAAC
Locus tag: Spro_1297
Spro_1297 -85 6 TTATTGTTATGTTATAACATAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: omr1
Ortholog function: predicted zinc-related TonB-dependent outer membrane transporter
Citrobacter koseri ATCC BAA-895 CKO_00835 -45 6.3 GATATGTTATGTTATAACATATC
Serratia proteamaculans 568 Spro_1297 -85 6 TTATTGTTATGTTATAACATAAC
-80 5.7 GTTATGTTATAACATAACAAAAA
Position: -43
Score: 6.5
Sequence: GATATGTTATAATATAACAATTA
Locus tag: Spro_1939
Spro_1939 -43 6.5 GATATGTTATAATATAACAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dksA2
Ortholog function: DnaK suppressor protein
Citrobacter koseri ATCC BAA-895 CKO_00932 -49 6.2 TTAATGTTATGTTATAACGTTTC
Serratia proteamaculans 568 Spro_1939 -43 6.5 GATATGTTATAATATAACAATTA
Position: -69
Score: 5.8
Sequence: GATATGTTATAACATAACAAAAT
Locus tag: Spro_2628
Spro_2628 -69 5.8 GATATGTTATAACATAACAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciA
Ortholog function: protein of unknown function DUF198
Citrobacter koseri ATCC BAA-895 CKO_00933 -49 6.2 TTAATGTTATGTTATAACGTTTC
Serratia proteamaculans 568 Spro_2628 -69 5.8 GATATGTTATAACATAACAAAAT
Position: -51
Score: 5.7
Sequence: CGAATGTTATAATATCACGCCTC
Locus tag: Spro_2773
Spro_2773 -51 5.7 CGAATGTTATAATATCACGCCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: high-affinity zinc ABC transporter, substrate-binding protein
Escherichia coli str. K-12 substr. MG1655 b1857 -52 6.5 GAAATGTTATAATATCACACTTC
Salmonella typhimurium LT2 STM1891 -52 6.6 AGAATGTTATAATATCACATTTC
Citrobacter koseri ATCC BAA-895 CKO_01106 -37 6.6 AGAATGTTATAATATCACATTTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02372 -100 6.3 TGAATGTTATAATATCACATCAC
Enterobacter sp. 638 Ent638_2426 -52 6.1 CGAATGTTATAATATCACATCCA
Erwinia amylovora ATCC 49946 EAM_2000 -52 5.9 CAAATGTTATAATATCACAAAAT
Yersinia pestis KIM y2249 -51 5.6 TGAATGTTATAATATTACGCTTT
Serratia proteamaculans 568 Spro_2773 -51 5.7 CGAATGTTATAATATCACGCCTC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2484 -53 6.3 GTAATGTTATAATATAACAAACA
Edwardsiella tarda EIB202 ETAE_1443 -50 6.6 GGAATGTTATAATATAACGTTTC
Proteus mirabilis HI4320 PMI1152 -50 6.7 GAAACGTTATAATATAACATTTC
Photorhabdus luminescens subsp. laumondii TTO1 plu2115 -51 6.6 GAGATGTTATAATATAACAATTC
Position: -50
Score: 5.8
Sequence: GAGGCGTGATATTATAACATTCG
Locus tag: Spro_2774
Spro_2774 -50 5.8 GAGGCGTGATATTATAACATTCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuC
Ortholog function: high-affinity zinc ABC transporter, ATP-binding protein
Escherichia coli str. K-12 substr. MG1655 b1858 -49 6.5 GAAGTGTGATATTATAACATTTC
Salmonella typhimurium LT2 STM1892.S -49 6.7 GAAATGTGATATTATAACATTCT
Citrobacter koseri ATCC BAA-895 CKO_01105 -49 6.7 GAAATGTGATATTATAACATTCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02373 -49 6.4 GTGATGTGATATTATAACATTCA
Enterobacter sp. 638 Ent638_2427 -48 6.2 TGGATGTGATATTATAACATTCG
Erwinia amylovora ATCC 49946 EAM_2001 -48 6.1 ATTTTGTGATATTATAACATTTG
Yersinia pestis KIM y2250 -47 5.7 AAAGCGTAATATTATAACATTCA
Serratia proteamaculans 568 Spro_2774 -50 5.8 GAGGCGTGATATTATAACATTCG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2485 -46 6.4 TGTTTGTTATATTATAACATTAC
Edwardsiella tarda EIB202 ETAE_1442 -72 6.7 GAAACGTTATATTATAACATTCC
Proteus mirabilis HI4320 PMI1151 -47 6.7 GAAATGTTATATTATAACGTTTC
Photorhabdus luminescens subsp. laumondii TTO1 plu2114 -48 6.6 GAATTGTTATATTATAACATCTC
Position: -47
Score: 5.4
Sequence: GAGATGTTTTGTTATAACGTATC
Locus tag: Spro_3158
Spro_3158 -47 5.4 GAGATGTTTTGTTATAACGTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_00947
Ortholog function: hypothetical protein
Citrobacter koseri ATCC BAA-895 CKO_00947 -111 5.8 GTTATGTTATTTTATAACATCCA
Serratia proteamaculans 568 Spro_3158 -47 5.4 GAGATGTTTTGTTATAACGTATC
Position: -3
Score: 5.3
Sequence: TTTATGTTACTTTATAACAATAA
Locus tag: Spro_3632
Spro_3632 -3 5.3 TTTATGTTACTTTATAACAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA3248
Ortholog function: ABC-type uncharacterized transport system, periplasmic component
Yersinia pestis KIM y1329 6 5.1 TATGTGTTACATTATAACGGTTT
Serratia proteamaculans 568 Spro_3632 -3 5.3 TTTATGTTACTTTATAACAATAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3248 -3 5.7 ATAATGTTACATTATAACGCTTT
Proteus mirabilis HI4320 PMI1519 -42 6.1 GTGATGTTATATTATAACAAAAT
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