Propagation of Zur regulog to Serratia proteamaculans 568
| Source regulog: | Zur - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Serratia proteamaculans 568 |
| Orthologous TF(s) | Spro_4457 |
| Regulated genes | 9 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -185
Score: 5.8 Sequence: GTGATGTTATAATGTAACACTTA
Locus tag: Spro_1121
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| Spro_1121 | -185 | 5.8 | GTGATGTTATAATGTAACACTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: znuC2 | ||||
| Ortholog function: putative zinc ABC transporter, ATP-binding protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_04054 | -141 | 6.1 | TTATTGTTATGTTATAACATTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00951 | -45 | 5.7 | CATTTGTTATGTTATAACGTTAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03035 | -108 | 6 | TTATTGTTATGTTATAACATTAA |
| Enterobacter sp. 638 | Ent638_3178 | -140 | 5.9 | TTAGTGTTATGTTATAACATTAT |
| Serratia proteamaculans 568 | Spro_1121 | -185 | 5.8 | GTGATGTTATAATGTAACACTTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3756 | -123 | 6.5 | GATATGTTATAATATAACAATTA |
|
Position: -36
Score: 6.2 Sequence: TTATTGTTATAGTATAACATTAC
Locus tag: Spro_1125
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| Spro_1125 | -36 | 6.2 | TTATTGTTATAGTATAACATTAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rpmE2 | ||||
| Ortholog function: 50S ribosomal protein L31 paralog | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0296 | -34 | 5.6 | TTATGGTTATGTTATAACATAAC |
| Salmonella typhimurium LT2 | STM0469 | -35 | 5.8 | TTATTGTTATGTTATAACATAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02696 | -35 | 5.5 | TTATTGTTACGTTATAACATAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00435 | -35 | 5.5 | TTATTGTTATGTTATAACGTAAT |
| Enterobacter sp. 638 | Ent638_0934 | -37 | 5.6 | CTTTTGTTATGTTATAACAAAAC |
| Erwinia amylovora ATCC 49946 | EAM_1015 | -36 | 6 | TTTTGGTTATATTATAACATATC |
| Yersinia pestis KIM | y1048 | -36 | 5.9 | ATGATGTTACATTATAACATACT |
| Serratia proteamaculans 568 | Spro_1125 | -36 | 6.2 | TTATTGTTATAGTATAACATTAC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1168 | -31 | 6 | GATATGTTATAACATAACAATTG |
| Proteus mirabilis HI4320 | PMI3379 | -38 | 6.5 | ATATTGTTATATTATAACATTAC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0036 | -32 | 6.2 | GTAATGTTATATTATTACAATTT |
|
Position: -85
Score: 6 Sequence: TTATTGTTATGTTATAACATAAC
Locus tag: Spro_1297
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| Spro_1297 | -85 | 6 | TTATTGTTATGTTATAACATAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: omr1 | ||||
| Ortholog function: predicted zinc-related TonB-dependent outer membrane transporter | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00835 | -45 | 6.3 | GATATGTTATGTTATAACATATC |
| Serratia proteamaculans 568 | Spro_1297 | -85 | 6 | TTATTGTTATGTTATAACATAAC |
| -80 | 5.7 | GTTATGTTATAACATAACAAAAA | ||
|
Position: -43
Score: 6.5 Sequence: GATATGTTATAATATAACAATTA
Locus tag: Spro_1939
|
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| Spro_1939 | -43 | 6.5 | GATATGTTATAATATAACAATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dksA2 | ||||
| Ortholog function: DnaK suppressor protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00932 | -49 | 6.2 | TTAATGTTATGTTATAACGTTTC |
| Serratia proteamaculans 568 | Spro_1939 | -43 | 6.5 | GATATGTTATAATATAACAATTA |
|
Position: -69
Score: 5.8 Sequence: GATATGTTATAACATAACAAAAT
Locus tag: Spro_2628
|
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| Spro_2628 | -69 | 5.8 | GATATGTTATAACATAACAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yciA | ||||
| Ortholog function: protein of unknown function DUF198 | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00933 | -49 | 6.2 | TTAATGTTATGTTATAACGTTTC |
| Serratia proteamaculans 568 | Spro_2628 | -69 | 5.8 | GATATGTTATAACATAACAAAAT |
|
Position: -51
Score: 5.7 Sequence: CGAATGTTATAATATCACGCCTC
Locus tag: Spro_2773
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| Spro_2773 | -51 | 5.7 | CGAATGTTATAATATCACGCCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: znuA | ||||
| Ortholog function: high-affinity zinc ABC transporter, substrate-binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1857 | -52 | 6.5 | GAAATGTTATAATATCACACTTC |
| Salmonella typhimurium LT2 | STM1891 | -52 | 6.6 | AGAATGTTATAATATCACATTTC |
| Citrobacter koseri ATCC BAA-895 | CKO_01106 | -37 | 6.6 | AGAATGTTATAATATCACATTTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02372 | -100 | 6.3 | TGAATGTTATAATATCACATCAC |
| Enterobacter sp. 638 | Ent638_2426 | -52 | 6.1 | CGAATGTTATAATATCACATCCA |
| Erwinia amylovora ATCC 49946 | EAM_2000 | -52 | 5.9 | CAAATGTTATAATATCACAAAAT |
| Yersinia pestis KIM | y2249 | -51 | 5.6 | TGAATGTTATAATATTACGCTTT |
| Serratia proteamaculans 568 | Spro_2773 | -51 | 5.7 | CGAATGTTATAATATCACGCCTC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2484 | -53 | 6.3 | GTAATGTTATAATATAACAAACA |
| Edwardsiella tarda EIB202 | ETAE_1443 | -50 | 6.6 | GGAATGTTATAATATAACGTTTC |
| Proteus mirabilis HI4320 | PMI1152 | -50 | 6.7 | GAAACGTTATAATATAACATTTC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2115 | -51 | 6.6 | GAGATGTTATAATATAACAATTC |
|
Position: -50
Score: 5.8 Sequence: GAGGCGTGATATTATAACATTCG
Locus tag: Spro_2774
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| Spro_2774 | -50 | 5.8 | GAGGCGTGATATTATAACATTCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: znuC | ||||
| Ortholog function: high-affinity zinc ABC transporter, ATP-binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1858 | -49 | 6.5 | GAAGTGTGATATTATAACATTTC |
| Salmonella typhimurium LT2 | STM1892.S | -49 | 6.7 | GAAATGTGATATTATAACATTCT |
| Citrobacter koseri ATCC BAA-895 | CKO_01105 | -49 | 6.7 | GAAATGTGATATTATAACATTCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02373 | -49 | 6.4 | GTGATGTGATATTATAACATTCA |
| Enterobacter sp. 638 | Ent638_2427 | -48 | 6.2 | TGGATGTGATATTATAACATTCG |
| Erwinia amylovora ATCC 49946 | EAM_2001 | -48 | 6.1 | ATTTTGTGATATTATAACATTTG |
| Yersinia pestis KIM | y2250 | -47 | 5.7 | AAAGCGTAATATTATAACATTCA |
| Serratia proteamaculans 568 | Spro_2774 | -50 | 5.8 | GAGGCGTGATATTATAACATTCG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2485 | -46 | 6.4 | TGTTTGTTATATTATAACATTAC |
| Edwardsiella tarda EIB202 | ETAE_1442 | -72 | 6.7 | GAAACGTTATATTATAACATTCC |
| Proteus mirabilis HI4320 | PMI1151 | -47 | 6.7 | GAAATGTTATATTATAACGTTTC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2114 | -48 | 6.6 | GAATTGTTATATTATAACATCTC |
|
Position: -47
Score: 5.4 Sequence: GAGATGTTTTGTTATAACGTATC
Locus tag: Spro_3158
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| Spro_3158 | -47 | 5.4 | GAGATGTTTTGTTATAACGTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_00947 | ||||
| Ortholog function: hypothetical protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00947 | -111 | 5.8 | GTTATGTTATTTTATAACATCCA |
| Serratia proteamaculans 568 | Spro_3158 | -47 | 5.4 | GAGATGTTTTGTTATAACGTATC |
|
Position: -3
Score: 5.3 Sequence: TTTATGTTACTTTATAACAATAA
Locus tag: Spro_3632
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| Spro_3632 | -3 | 5.3 | TTTATGTTACTTTATAACAATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ECA3248 | ||||
| Ortholog function: ABC-type uncharacterized transport system, periplasmic component | ||||
| Yersinia pestis KIM | y1329 | 6 | 5.1 | TATGTGTTACATTATAACGGTTT |
| Serratia proteamaculans 568 | Spro_3632 | -3 | 5.3 | TTTATGTTACTTTATAACAATAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3248 | -3 | 5.7 | ATAATGTTACATTATAACGCTTT |
| Proteus mirabilis HI4320 | PMI1519 | -42 | 6.1 | GTGATGTTATATTATAACAAAAT |