Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RutR regulog to Serratia proteamaculans 568

Reference regulog properties
Source regulog: RutR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Serratia proteamaculans 568
Orthologous TF(s) Spro_1824
Regulated genes 2
Built upon 13 sites [see more]
Predicted regulatory interactions in Serratia proteamaculans 568
Locus tag Position Score Sequence
Position: -187
Score: 5.8
Sequence: TTTTGACCAAATGGTCTGTT
Locus tag: Spro_1823
Spro_1823 -187 5.8 TTTTGACCAAATGGTCTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rutA
Ortholog function: Pyrimidine oxygenase
Escherichia coli str. K-12 substr. MG1655 b1012 -126 6.2 TTTTGACCGTTTAGTCCACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01038 -181 6 TTTTGACCATCCAGTCCACT
Enterobacter sp. 638 Ent638_1525 -185 6.1 TTTTGACCATTCAGTCCACT
Serratia proteamaculans 568 Spro_1823 -187 5.8 TTTTGACCAAATGGTCTGTT
Position: -137
Score: 4.4
Sequence: TGTTGAGCGAGTGGTCTAAA
Position: -118
Score: 5
Sequence: AACAGACCATTTGGTCAAAA
Locus tag: Spro_1824
Spro_1824 -137 4.4 TGTTGAGCGAGTGGTCTAAA
-118 5 AACAGACCATTTGGTCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rutR
Ortholog function: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01039 -123 4.2 AGTGGACTGGATGGTCAAAA
Serratia proteamaculans 568 Spro_1824 -118 5 AACAGACCATTTGGTCAAAA
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