Propagation of Fur regulog to Escherichia coli O157:H7 str. EC4024
| Source regulog: | Fur - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Escherichia coli O157:H7 str. EC4024 |
| Orthologous TF(s) | EscherichcoliO157_010100023839 |
| Regulated genes | 40 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -132
Score: 4.6 Sequence: AGAAACCATTCTCATTATC
Locus tag: EscherichcoliO157_010100000305
|
||||
| EscherichcoliO157_010100000305 | -132 | 4.6 | AGAAACCATTCTCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: ferrous iron transport protein A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3408 | -138 | 3.4 | GcTgATagaAAcCATTcTC |
| -132 | 4.5 | AGAAACCATTCTCATTATC | ||
| Salmonella typhimurium LT2 | STM3505 | -140 | 3.5 | GAagATagaAAcCATTcTC |
| -133 | 4.5 | AGAAACCATTCTCATTATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04830 | -139 | 4.1 | GATGATAAAAACCATTCTC |
| -133 | 4.7 | AAAAACCATTCTCATTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03778 | -133 | 4.1 | GATGATAAAAACCATTCTC |
| -127 | 4.7 | AAAAACCATTCTCATTATC | ||
| Enterobacter sp. 638 | Ent638_3821 | -62 | 4.5 | AGAAACCATTCTCATTATC |
| Yersinia pestis KIM | y3912 | -118 | 4.1 | GAGCATGAAAATAATTCTC |
| -112 | 4.4 | GAAAATAATTCTCAGTATT | ||
| Serratia proteamaculans 568 | Spro_4628 | -155 | 4.3 | GAATACGATAATGATTCTC |
| -149 | 4.9 | GATAATGATTCTCACTATT | ||
| Edwardsiella tarda EIB202 | ETAE_3283 | -163 | 4.3 | GAAAACGATTATCAGTTTT |
| -157 | 4.1 | GATTATCAGTTTTATTATA | ||
| Proteus mirabilis HI4320 | PMI2920 | -138 | 4 | AAAGATGGTTATAATTCTC |
| -132 | 4.3 | GGTTATAATTCTCATTTGC | ||
| -59 | 4.8 | GTTAATAATTATCAGTATC | ||
| -53 | 4.6 | AATTATCAGTATCATTATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0209 | -244 | 4 | AATGTTGGTTATTATTCTC |
| -238 | 4.2 | GGTTATTATTCTCATTTGC | ||
|
Position: -48
Score: 4.5 Sequence: TCAAATGATAATCATGATC
Position: -42
Score: 5 Sequence: GATAATCATGATCATTCTC
Locus tag: EscherichcoliO157_010100000995
|
||||
| EscherichcoliO157_010100000995 | -48 | 4.5 | TCAAATGATAATCATGATC | |
| -42 | 5 | GATAATCATGATCATTCTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemT | ||||
| Ortholog function: hemin ABC transporter, substrate-binding protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02655 | -45 | 4.2 | GCGAATGATAATGATGATC |
| -39 | 4.7 | GATAATGATGATCATTTAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03089 | -133 | 4 | GATAATACCTATCATTACC |
| Enterobacter sp. 638 | Ent638_1739 | -50 | 4.2 | TTTGTTGATAATGATTATC |
| -44 | 5.1 | GATAATGATTATCATTGTT | ||
| Erwinia amylovora ATCC 49946 | EAM_1641 | -65 | 4.2 | TTTGTTGATAATGATTATC |
| -59 | 4.8 | GATAATGATTATCATTCCA | ||
| Yersinia pestis KIM | y0541 | -48 | 3.7 | GATAATGCTTATCACACTG |
| -30 | 4.1 | GATAGTCGTTATCATTAAG | ||
| Serratia proteamaculans 568 | Spro_2167 | -68 | 4 | TCACATGATAATGATTCTC |
| -62 | 4.6 | GATAATGATTCTCACTTTG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1845 | -59 | 4.7 | GAAAATGATTCTCATTCAT |
| Edwardsiella tarda EIB202 | ETAE_1799 | -10 | 4.1 | TTATACGATAATGATTATC |
| -4 | 5.1 | GATAATGATTATCATTAAG | ||
| Proteus mirabilis HI4320 | PMI1428 | -52 | 5.1 | GATAACGATAATGATTATC |
| -46 | 5.4 | GATAATGATTATCATAATC | ||
| -40 | 4.4 | GATTATCATAATCATAACC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2634 | -54 | 4.7 | TATAACGATAATAATTCTC |
| -48 | 4.6 | GATAATAATTCTCACTATG | ||
|
Position: -78
Score: 4.5 Sequence: CGTAATGATAATCGCTATC
Locus tag: EscherichcoliO157_010100002272
|
||||
| EscherichcoliO157_010100002272 | -78 | 4.5 | CGTAATGATAATCGCTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yijD | ||||
| Ortholog function: iron permease FTR1 | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01045 | -76 | 5 | TGTAATGATAATCACTATC |
| -70 | 4.2 | GATAATCACTATCATAAAT | ||
| Enterobacter sp. 638 | Ent638_1545 | -76 | 4.9 | CGTAATGATAATCACTATC |
| Erwinia amylovora ATCC 49946 | EAM_2059 | -80 | 4.6 | GATAATGATAATCCCTATC |
| Yersinia pestis KIM | y2452 | -84 | 4.4 | CAGAATGATAATCACAATC |
| -78 | 4.3 | GATAATCACAATCGTTTTA | ||
| Serratia proteamaculans 568 | Spro_2929 | -109 | 4.8 | CAGAATGATAATCACTATC |
|
Position: -70
Score: 4.7 Sequence: ATAAATTATTCTCATTATT
Locus tag: EscherichcoliO157_010100002782
|
||||
| EscherichcoliO157_010100002782 | -70 | 4.7 | ATAAATTATTCTCATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cfrA | ||||
| Ortholog function: TonB-dependent outer membrane receptor | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_01134 | -4 | 4.8 | TGTAATGATAATTATTTTT |
| 2 | 5 | GATAATTATTTTTATTATC | ||
| 8 | 4.5 | TATTTTTATTATCATTTTC | ||
| Yersinia pestis KIM | y0850 | -103 | 4.6 | AGTAATGATAATTGATATC |
| -97 | 4.4 | GATAATTGATATCATTTGC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2722 | -100 | 4.6 | GCAAATGATTTTAATTTTC |
| -94 | 4.3 | GATTTTAATTTTCATTTAC | ||
|
Position: -184
Score: 4.4 Sequence: ATTATTGATAACTATTTGC
Position: -178
Score: 4.2 Sequence: GATAACTATTTGCATTTGC
Locus tag: EscherichcoliO157_010100006651
|
||||
| EscherichcoliO157_010100006651 | -184 | 4.4 | ATTATTGATAACTATTTGC | |
| -178 | 4.2 | GATAACTATTTGCATTTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fepA | ||||
| Ortholog function: TonB-dependent siderophore receptor FepA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0584 | -184 | 4.1 | ATTATTGATAACTATTTGC |
| -178 | 4 | GATAACTATTTGCATTTGC | ||
| Salmonella typhimurium LT2 | STM0585 | -132 | 4.1 | ATTATTGATAACTATTTGC |
| -126 | 4 | GATAACTATTTGCATTTGC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02579 | -246 | 4.4 | GATAACTATTTTCATTTGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00602 | -197 | 4.1 | ATTATTGATAACTATTTGC |
| -191 | 4 | GATAACTATTTGCATTTGC | ||
| Enterobacter sp. 638 | Ent638_1116 | -196 | 4.4 | ATTATTGATAACTATTTTC |
| -190 | 4.4 | GATAACTATTTTCATTTGC | ||
|
Position: -37
Score: 4.9 Sequence: GATAACGATAATTAATTTC
Position: -31
Score: 5 Sequence: GATAATTAATTTCATTATC
Locus tag: EscherichcoliO157_010100006686
|
||||
| EscherichcoliO157_010100006686 | -37 | 4.9 | GATAACGATAATTAATTTC | |
| -31 | 5 | GATAATTAATTTCATTATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fepD | ||||
| Ortholog function: iron-enterobactin (enterochelin) ABC transporter membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0590 | -37 | 4.8 | GATAACGATAATTAATTTC |
| -31 | 4.9 | GATAATTAATTTCATTATC | ||
| Salmonella typhimurium LT2 | STM0592 | -37 | 4.8 | GATAACGATAATTACTATC |
| -31 | 5 | GATAATTACTATCATTATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02571 | -37 | 4.8 | GATAACGATAATTACTATC |
| -31 | 5 | GATAATTACTATCATTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00608 | -43 | 4.8 | GATAACGATAATTACTATC |
| -37 | 5 | GATAATTACTATCATTATC | ||
| Enterobacter sp. 638 | Ent638_1122 | -30 | 4.8 | GATAACGATAATTACTATC |
| -24 | 5 | GATAATTACTATCATTATC | ||
| Serratia proteamaculans 568 | Spro_3424 | -48 | 4.4 | AATAATGATAATAAAACTC |
| -42 | 4.4 | GATAATAAAACTCATTTAT | ||
|
Position: -98
Score: 5 Sequence: GATAATGAAATTAATTATC
Position: -92
Score: 5 Sequence: GAAATTAATTATCGTTATC
Locus tag: EscherichcoliO157_010100006691
|
||||
| EscherichcoliO157_010100006691 | -98 | 5 | GATAATGAAATTAATTATC | |
| -92 | 5 | GAAATTAATTATCGTTATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybdA | ||||
| Ortholog function: enterobactin exporter EntS, MFS family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0591 | -98 | 4.8 | GATAATGAAATTAATTATC |
| -92 | 4.9 | GAAATTAATTATCGTTATC | ||
| Salmonella typhimurium LT2 | STM0593 | -98 | 4.9 | GATAATGATAGTAATTATC |
| -92 | 4.8 | GATAGTAATTATCGTTATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02570 | -99 | 4.9 | GATAATGATAGTAATTATC |
| -93 | 4.8 | GATAGTAATTATCGTTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00609 | -94 | 4.9 | GATAATGATAGTAATTATC |
| -88 | 4.8 | GATAGTAATTATCGTTATC | ||
| Enterobacter sp. 638 | Ent638_1123 | -94 | 4.9 | GATAATGATAGTAATTATC |
| -88 | 4.8 | GATAGTAATTATCGTTATC | ||
| Serratia proteamaculans 568 | Spro_3423 | -112 | 4.4 | ATAAATGAGTTTTATTATC |
| -106 | 4.4 | GAGTTTTATTATCATTATT | ||
|
Position: -159
Score: 5.3 Sequence: AATAATGATTATCATTTAT
Position: -44
Score: 4.7 Sequence: GAAAATGAGAAGCATTAAC
Locus tag: EscherichcoliO157_010100006696
|
||||
| EscherichcoliO157_010100006696 | -159 | 5.3 | AATAATGATTATCATTTAT | |
| -44 | 4.7 | GAAAATGAGAAGCATTAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fepB | ||||
| Ortholog function: ferric enterobactin (enterochelin) binding protein; periplasmic component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0592 | -230 | 4.7 | GAAAATGAGAAGCATTATT |
| Citrobacter koseri ATCC BAA-895 | CKO_02569 | -203 | 4.7 | GAAAATGAGAAGCATTAAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00610 | -166 | 4.8 | GATATTAAGAATAATTATC |
| -160 | 4.6 | AAGAATAATTATCATTTAT | ||
| Enterobacter sp. 638 | Ent638_1124 | -159 | 4.6 | AAGAATAATTATCATTTAT |
| -44 | 4.7 | GAAAATGAGAAGCATTAAC | ||
|
Position: -48
Score: 5.2 Sequence: ATAAATGATAATCATTATT
Locus tag: EscherichcoliO157_010100006701
|
||||
| EscherichcoliO157_010100006701 | -48 | 5.2 | ATAAATGATAATCATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: entC | ||||
| Ortholog function: isochorismate synthetase, siderophore biosynthesis | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0593 | -163 | 4.6 | AATAATGCTTCTCATTTTC |
| -48 | 5 | ATAAATGATAATCATTATT | ||
| Salmonella typhimurium LT2 | STM0595 | -170 | 4.9 | AGAAATAATAATCATTATT |
| -164 | 4.4 | AATAATCATTATTATACAC | ||
|
Position: -47
Score: 5.2 Sequence: TATAATGAGAATTATTATC
Position: -41
Score: 4.9 Sequence: GAGAATTATTATCATTAAA
Locus tag: EscherichcoliO157_010100009815
|
||||
| EscherichcoliO157_010100009815 | -47 | 5.2 | TATAATGAGAATTATTATC | |
| -41 | 4.9 | GAGAATTATTATCATTAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gpmA | ||||
| Ortholog function: phosphoglyceromutase 1 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0755 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.7 | GAGAATTATTATCATTAAA | ||
| Salmonella typhimurium LT2 | STM0772 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.5 | GAGAATTATTATCATTACA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02381 | -46 | 5 | TATAATGAGAATTATTATC |
| -40 | 4.5 | GAGAATTATTATCATTCAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00768 | -96 | 4.6 | TATAATGAGAATAGTTATC |
| Enterobacter sp. 638 | Ent638_1246 | -164 | 4.7 | TATAATGAGAATTGTTATC |
| -158 | 4.1 | GAGAATTGTTATCATTCAA | ||
| Yersinia pestis KIM | y3048 | -103 | 5.3 | TATAATGATAATAATTATC |
| -97 | 4.6 | GATAATAATTATCATTGAA | ||
| Serratia proteamaculans 568 | Spro_1288 | -51 | 4.9 | TATAATGATTTTCGTTATC |
| Edwardsiella tarda EIB202 | ETAE_2569 | -49 | 4.6 | CATGATGATAATAATTATC |
| -43 | 5.3 | GATAATAATTATCATTATA | ||
|
Position: -129
Score: 4.4 Sequence: GATAATGCTTATCAAAATT
Position: -123
Score: 4.6 Sequence: GCTTATCAAAATTATTATC
Position: -117
Score: 4.4 Sequence: CAAAATTATTATCACTTGC
Locus tag: EscherichcoliO157_010100010335
|
||||
| EscherichcoliO157_010100010335 | -129 | 4.4 | GATAATGCTTATCAAAATT | |
| -123 | 4.6 | GCTTATCAAAATTATTATC | ||
| -117 | 4.4 | CAAAATTATTATCACTTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fiu | ||||
| Ortholog function: iron outer membrane transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0805 | -123 | 4.4 | GCTTATCAAAATTATTATC |
| -117 | 4.5 | CAAAATTATTATCACTTTC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01250 | -126 | 4.2 | GCAAATGATAACTATTCTT |
| -120 | 4.1 | GATAACTATTCTTTTTATC | ||
|
Position: -157
Score: 4.8 Sequence: GGGAATGGTAATCATTATT
Locus tag: EscherichcoliO157_010100010852
|
||||
| EscherichcoliO157_010100010852 | -157 | 4.8 | GGGAATGGTAATCATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yncD | ||||
| Ortholog function: TonB-dependent siderophore outer membrane receptor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1451 | -157 | 4.7 | GGGAATGGTAATCATTATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01493 | -181 | 4.5 | GCGAATAGTAATCATTATT |
|
Position: -103
Score: 4.9 Sequence: AATAATGATTACCATTCCC
Locus tag: EscherichcoliO157_010100010857
|
||||
| EscherichcoliO157_010100010857 | -103 | 4.9 | AATAATGATTACCATTCCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yncE | ||||
| Ortholog function: putative receptor, ATP binding | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1452 | -103 | 4.6 | AATAATGATTACCATTCCC |
| Salmonella typhimurium LT2 | STM1586 | -103 | 5.2 | AATAATGATTATTATTCTC |
| Citrobacter koseri ATCC BAA-895 | CKO_01494 | -202 | 4.5 | AATAATGATTACTATTCGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01908 | -103 | 4.5 | AATAATGATTACTATTCGC |
| Enterobacter sp. 638 | Ent638_2098 | -100 | 4.8 | AATAATGATTACTATTCTC |
| Serratia proteamaculans 568 | Spro_0586 | -143 | 4.8 | AATAATGATTACTATTCTC |
|
Position: -4
Score: 4.7 Sequence: GCTAATGATAACCATTCCC
Locus tag: EscherichcoliO157_010100011102
|
||||
| EscherichcoliO157_010100011102 | -4 | 4.7 | GCTAATGATAACCATTCCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yddA | ||||
| Ortholog function: fused predicted multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1496 | -4 | 4.4 | GCTAATGATAACCATTCCC |
|
Position: -345
Score: 4.7 Sequence: AAAAATAAAACTCATTCTC
Position: -117
Score: 4.3 Sequence: TTGAATGATTCTCAATTAC
Locus tag: EscherichcoliO157_010100012106
|
||||
| EscherichcoliO157_010100012106 | -345 | 4.7 | AAAAATAAAACTCATTCTC | |
| -117 | 4.3 | TTGAATGATTCTCAATTAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_02848 | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02848 | -175 | 4.1 | TTGAATGATTCTCAATTAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02105 | -210 | 4.1 | TTGAATGATTCTCAATTAC |
| Enterobacter sp. 638 | Ent638_3442 | -118 | 4.1 | TTGAATGATTCTCAATTAC |
| Yersinia pestis KIM | y3343 | -41 | 4.2 | ACAAACGATTTTGATTATC |
| -35 | 4.6 | GATTTTGATTATCATTCGC | ||
| Serratia proteamaculans 568 | Spro_1016 | -52 | 4.3 | GCTAATGAGAGTGATTATC |
|
Position: -227
Score: 4.4 Sequence: AAGAATAAAAATGATTTTT
Position: -71
Score: 4.3 Sequence: ATGATTAACAATCATTATC
Position: -65
Score: 4.9 Sequence: AACAATCATTATCATTTGC
Locus tag: EscherichcoliO157_010100012301
|
||||
| EscherichcoliO157_010100012301 | -227 | 4.4 | AAGAATAAAAATGATTTTT | |
| -71 | 4.3 | ATGATTAACAATCATTATC | ||
| -65 | 4.9 | AACAATCATTATCATTTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqjH | ||||
| Ortholog function: FAD-binding 9, siderophore-interacting domain protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3070 | -71 | 4.2 | ATGATTAACAATCATTATC |
| -65 | 4.6 | AACAATCATTATCATTTGC | ||
| Salmonella typhimurium LT2 | STM3214 | -62 | 4.3 | AACAATCATTATCATTTAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03499 | -62 | 4.5 | GGCAATCATTATCATTTGC |
| Enterobacter sp. 638 | Ent638_3524 | -61 | 4.1 | AGCAATCATTATCATTTAA |
|
Position: -198
Score: 4.6 Sequence: TTAGATAATAATCATTATC
Position: -65
Score: 4.6 Sequence: TGAACTGATAATCATTATC
Position: -59
Score: 5.2 Sequence: GATAATCATTATCACTAAC
Locus tag: EscherichcoliO157_010100013112
|
||||
| EscherichcoliO157_010100013112 | -198 | 4.6 | TTAGATAATAATCATTATC | |
| -65 | 4.6 | TGAACTGATAATCATTATC | ||
| -59 | 5.2 | GATAATCATTATCACTAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: scaffold protein for iron-sulfur cluster assembly | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1684 | -65 | 4.4 | TGAACTGATAATCATTATC |
| -59 | 5.1 | GATAATCATTATCACTAAC | ||
| Salmonella typhimurium LT2 | STM1369 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01717 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02141 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Enterobacter sp. 638 | Ent638_1760 | -67 | 4.4 | TGAAGTGATAATCGTTATC |
| -61 | 4.7 | GATAATCGTTATCACTAAC | ||
| Yersinia pestis KIM | y1934 | -129 | 4.5 | TGAAGTGATAATTATTATC |
| -123 | 4.8 | GATAATTATTATCACTACC | ||
| Serratia proteamaculans 568 | Spro_2179 | -77 | 4.4 | TGAAGTGATAATCGTTATC |
| -71 | 4.7 | GATAATCGTTATCACTAAC | ||
| Proteus mirabilis HI4320 | PMI1416 | -66 | 4.4 | GATAAGGGTTATCATTACC |
| -60 | 4 | GGTTATCATTACCATTAGA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2622 | -87 | 4.4 | GATAAAGGTTATCATTACC |
| -81 | 4.3 | GGTTATCATTACCATTATA | ||
|
Position: -14
Score: 4.7 Sequence: GATAATAAGAATCATTGTT
Locus tag: EscherichcoliO157_010100013227
|
||||
| EscherichcoliO157_010100013227 | -14 | 4.7 | GATAATAAGAATCATTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemP | ||||
| Ortholog function: hemin uptake protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1705 | -47 | 4.1 | AATATTGATAATAAGAATC |
| -41 | 4.6 | GATAATAAGAATCATTGTT | ||
| Salmonella typhimurium LT2 | STM1346 | -47 | 4.5 | ATTATTGATAATAATAATC |
| -41 | 4.7 | GATAATAATAATCATTGTG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01729 | -50 | 4.7 | AATATTGATAATAATAATC |
| -44 | 4.9 | GATAATAATAATCATTGTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03737 | 14 | 4.1 | CTTGATGATAATCATTCTT |
| 20 | 4.8 | GATAATCATTCTTGTTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02163 | -10 | 4.8 | ATTATTGATAATGATTATC |
| -4 | 5.1 | GATAATGATTATCATTGTT | ||
| Enterobacter sp. 638 | Ent638_1742 | -50 | 4.2 | TTTGTTGATAATGATTATC |
| -44 | 5.1 | GATAATGATTATCATTGTT | ||
| Serratia proteamaculans 568 | Spro_2170 | -68 | 4 | TCACATGATAATGATTCTC |
| -62 | 4.6 | GATAATGATTCTCACTTTG | ||
| Edwardsiella tarda EIB202 | ETAE_1796 | -10 | 4.1 | TTATACGATAATGATTATC |
| -4 | 5.1 | GATAATGATTATCATTAAG | ||
| Proteus mirabilis HI4320 | PMI1424 | -52 | 5.1 | GATAACGATAATGATTATC |
| -46 | 5.4 | GATAATGATTATCATAATC | ||
| -40 | 4.4 | GATTATCATAATCATAACC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2631 | -54 | 4.7 | TATAACGATAATAATTCTC |
| -48 | 4.6 | GATAATAATTCTCACTATG | ||
|
Position: -99
Score: 4.9 Sequence: GGCATTGATAATCATTTTC
Position: -93
Score: 5.2 Sequence: GATAATCATTTTCAATATC
Locus tag: EscherichcoliO157_010100014062
|
||||
| EscherichcoliO157_010100014062 | -99 | 4.9 | GGCATTGATAATCATTTTC | |
| -93 | 5.2 | GATAATCATTTTCAATATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sodA | ||||
| Ortholog function: manganese/iron superoxide dismutase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3908 | -99 | 4.7 | GGCATTGATAATCATTTTC |
| -93 | 5 | GATAATCATTTTCAATATC | ||
| Salmonella typhimurium LT2 | STM4055 | -99 | 4.7 | GGCATTGATAATCATTTTC |
| -93 | 5 | GATAATCATTTTCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03093 | -88 | 4.3 | GGCATTGATAAGCATTTTC |
| -82 | 4.4 | GATAAGCATTTTCAATATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04217 | -88 | 4.3 | GGCATTGATAAGCATTTTC |
| -82 | 4 | GATAAGCATTTTCAATACC | ||
| Enterobacter sp. 638 | Ent638_4063 | -100 | 4.7 | GGCATTGATAATCATTTTC |
| -94 | 5 | GATAATCATTTTCAATATC | ||
| Yersinia pestis KIM | y4080 | -104 | 4.4 | AGGTTTGATAATCATTTTC |
| -98 | 5 | GATAATCATTTTCAATATC | ||
| Serratia proteamaculans 568 | Spro_0081 | -105 | 4.7 | GGCATTGATAATCATTTTC |
| -99 | 5 | GATAATCATTTTCAATATC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0092 | -105 | 4.9 | AATAATCATTTTCAATATC |
| Proteus mirabilis HI4320 | PMI3036 | -95 | 4.6 | GGATATGATAATGATTTTC |
| -89 | 5.2 | GATAATGATTTTCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0075 | -102 | 4.3 | GGTATTGATAAGCATTTCC |
|
Position: 2
Score: 5.3 Sequence: GATATTGGTTATCATTATC
Locus tag: EscherichcoliO157_010100014527
|
||||
| EscherichcoliO157_010100014527 | 2 | 5.3 | GATATTGGTTATCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjjZ | ||||
| Ortholog function: putative membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4567 | -60 | 4.4 | GCAAATGATAAAAATTATC |
| -37 | 5.2 | GATATTGGTTATCATTATC | ||
| Salmonella typhimurium LT2 | STM4552 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4.2 | GGTTATCATTATCAATTCC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03427 | 2 | 4.9 | GCTATTGGTTATCATTATC |
| 8 | 4.1 | GGTTATCATTATCGGTATC | ||
| Enterobacter sp. 638 | Ent638_0529 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4 | GGTTATCATTATCATATTG | ||
| Erwinia amylovora ATCC 49946 | EAM_0565 | -70 | 4.3 | CAAAGTGATAATGATTAAC |
| -64 | 4.3 | GATAATGATTAACATATGC | ||
| -47 | 4.9 | GCTATTGGTAATCATTATC | ||
| -41 | 4.8 | GGTAATCATTATCATTTAT | ||
| Yersinia pestis KIM | y3754 | -4 | 4.9 | GATATTGGTTATGATTATC |
| 2 | 5.2 | GGTTATGATTATCATTATC | ||
| Serratia proteamaculans 568 | Spro_0646 | -39 | 4.7 | GATATTAGTTCTCATTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0738 | -89 | 5 | GATATTAGTTATCATTATC |
| -83 | 4.5 | AGTTATCATTATCATTTTT | ||
| Proteus mirabilis HI4320 | PMI2497 | -27 | 5.3 | AATAATGAAAATCATTATC |
| -21 | 5.2 | GAAAATCATTATCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4253 | -92 | 5.2 | GATATTGGTAATCATTATC |
| -86 | 4.7 | GGTAATCATTATCATTTGT | ||
|
Position: -57
Score: 4.7 Sequence: CTTTATAATAATCATTCTC
Position: -51
Score: 4.7 Sequence: AATAATCATTCTCGTTTAC
Locus tag: EscherichcoliO157_010100017331
|
||||
| EscherichcoliO157_010100017331 | -57 | 4.7 | CTTTATAATAATCATTCTC | |
| -51 | 4.7 | AATAATCATTCTCGTTTAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuA | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0150 | -57 | 4.4 | CTTTATAATAATCATTCTC |
| -51 | 4.5 | AATAATCATTCTCGTTTAC | ||
| Salmonella typhimurium LT2 | STM0191 | -56 | 4.8 | GGTTATAATAATAATTATC |
| -50 | 4.8 | AATAATAATTATCGTTTAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03218 | -57 | 4 | GGTCATAAGAATAATTCTC |
| -51 | 4.3 | AAGAATAATTCTCGTTTAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00165 | -56 | 4 | CGTCATAATAATAATTCTC |
| -50 | 4.5 | AATAATAATTCTCGTTTAC | ||
| Enterobacter sp. 638 | Ent638_0690 | -58 | 4.3 | GGTCATAATAATAATTCTC |
| -52 | 4.5 | AATAATAATTCTCGTTTAC | ||
|
Position: -131
Score: 5 Sequence: GAATTTGATAATCATTCTC
Position: -125
Score: 4.2 Sequence: GATAATCATTCTCGTTTGG
Locus tag: EscherichcoliO157_010100020348
|
||||
| EscherichcoliO157_010100020348 | -131 | 5 | GAATTTGATAATCATTCTC | |
| -125 | 4.2 | GATAATCATTCTCGTTTGG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mntH | ||||
| Ortholog function: Mn2+/Fe2+ transporter, NRAMP family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2392 | -68 | 4.7 | GAATTTGATAATCATTCTC |
| -62 | 4.2 | GATAATCATTCTCGTTTGG | ||
| Salmonella typhimurium LT2 | STM2408 | -68 | 4.5 | GCACTTGATAATCATTATC |
| -62 | 4.8 | GATAATCATTATCAATAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00404 | -50 | 4.3 | GCACTTGATAATCATTCTC |
| -44 | 4.5 | GATAATCATTCTCAATAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02743 | -68 | 4.3 | GAACTTGATAATCATTCGC |
| -62 | 4.3 | GATAATCATTCGCATTTTG | ||
| Enterobacter sp. 638 | Ent638_2926 | -67 | 4.8 | GATCTTGATAATCATTCTC |
| -61 | 4.8 | GATAATCATTCTCATTTTG | ||
| Yersinia pestis KIM | y1500 | -78 | 4 | GCGCTTGATAATTATTCTC |
| -72 | 4.6 | GATAATTATTCTCATTTAA | ||
| Serratia proteamaculans 568 | Spro_3415 | -66 | 4.3 | GCACTTGATAATTATTATC |
| -60 | 5.2 | GATAATTATTATCATTTAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0843 | -63 | 4.5 | GCACTTGATAATCATTATC |
| -57 | 5.2 | GATAATCATTATCATTTTT | ||
| Edwardsiella tarda EIB202 | ETAE_1142 | -134 | 4.5 | GCAGTTGATAATCATTATC |
|
Position: -200
Score: 4.9 Sequence: GGTAATGAGAATAATTAAC
Locus tag: EscherichcoliO157_010100022362
|
||||
| EscherichcoliO157_010100022362 | -200 | 4.9 | GGTAATGAGAATAATTAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppA | ||||
| Ortholog function: oligopeptide ABC transporter; periplasmic binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1243 | -245 | 4.7 | GGTAATGAGAATAATTAAC |
| Citrobacter koseri ATCC BAA-895 | CKO_01320 | -247 | 4.3 | GGTGATGAGAATTATTTTC |
| -241 | 4 | GAGAATTATTTTCAATAAG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02197 | -216 | 4.4 | GCAAATGAGAATTATTTTT |
| Enterobacter sp. 638 | Ent638_2302 | -247 | 4 | GTAGATGAGAATGATTTTC |
|
Position: -38
Score: 4.5 Sequence: ATAAATGATACTCACTCTC
Locus tag: EscherichcoliO157_010100022838
|
||||
| EscherichcoliO157_010100022838 | -38 | 4.5 | ATAAATGATACTCACTCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdiA | ||||
| Ortholog function: transcriptional regulator of ftsQAZ gene cluster (LuxR/UhpA family) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1916 | -38 | 4.4 | ATAAATGATACTCACTCTC |
| Salmonella typhimurium LT2 | STM1950 | -44 | 4.4 | ATTCATAATAATGATTATC |
| -38 | 5.3 | AATAATGATTATCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01029 | -44 | 4.4 | AAACATTATAATGATTATC |
| -38 | 5 | TATAATGATTATCAATCTC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02414 | -78 | 4.6 | ATTTATAATAATGATTATC |
| -72 | 4.4 | AATAATGATTATCAATCAG | ||
| Enterobacter sp. 638 | Ent638_2503 | -39 | 4.2 | AATAATGATTAGTTTTTTC |
|
Position: -333
Score: 4.7 Sequence: ATAAATGAAAATAATTATC
Position: -327
Score: 4.9 Sequence: GAAAATAATTATCATTACA
Locus tag: EscherichcoliO157_010100024378
|
||||
| EscherichcoliO157_010100024378 | -333 | 4.7 | ATAAATGAAAATAATTATC | |
| -327 | 4.9 | GAAAATAATTATCATTACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_02654 | ||||
| Ortholog function: hypothetical protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02654 | -45 | 4.2 | GCGAATGATAATGATGATC |
| -39 | 4.7 | GATAATGATGATCATTTAC | ||
|
Position: -126
Score: 3.7 Sequence: GGTAATGCGTTTTATTCCC
Locus tag: EscherichcoliO157_010100026703
|
||||
| EscherichcoliO157_010100026703 | -126 | 3.7 | GGTAATGCGTTTTATTCCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ftnA | ||||
| Ortholog function: ferritin | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1905 | -127 | 3.4 | GgTAATGcgttTtATTccC |
| -121 | 3 | GcgttTtATtccCATTcgt | ||
| Salmonella typhimurium LT2 | STM1935 | -100 | 4 | AATAATTAAATTTAATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01042 | -97 | 4.3 | AATAATTAAATTTATTATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02402 | -161 | 4 | ATAAATTAAAAGCATTCTC |
| -155 | 3.8 | TAAAAGCATTCTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_2486 | -103 | 3.7 | TATTTTAATAAATAATATC |
| -97 | 3.6 | AATAAATAATATCTTTATT | ||
| Erwinia amylovora ATCC 49946 | EAM_2940 | -131 | 4.4 | TGGAATGATTATCAATTAC |
| Yersinia pestis KIM | y2524 | -93 | 4.4 | AATAATGTGAATGATTATC |
| -87 | 4.1 | GTGAATGATTATCATGATG | ||
| Serratia proteamaculans 568 | Spro_1942 | -174 | 4.5 | GAAAATAGTTATCATAATT |
| -168 | 4 | AGTTATCATAATTATTTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2473 | -158 | 4.6 | TTAAATGATAATGAATATC |
| -152 | 4.8 | GATAATGAATATCAATAGC | ||
| Proteus mirabilis HI4320 | PMI1007 | -184 | 4.7 | GTTAATGATAATCAATTCC |
| -178 | 4.1 | GATAATCAATTCCATTAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2689 | -147 | 4.4 | TTAAATGAGATTCATTTTC |
| -141 | 4.4 | GAGATTCATTTTCATTTTT | ||
|
Position: -330
Score: 4.3 Sequence: TAATATTATTTTTATTTTC
Position: -268
Score: 4.6 Sequence: TCAAATGATAATAAATATC
Locus tag: EscherichcoliO157_010100028980
|
||||
| EscherichcoliO157_010100028980 | -330 | 4.3 | TAATATTATTTTTATTTTC | |
| -268 | 4.6 | TCAAATGATAATAAATATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydhY | ||||
| Ortholog function: oxidoreductase, Fe-S subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1674 | -267 | 4.5 | TCAAATGATAATAAATATC |
| Citrobacter koseri ATCC BAA-895 | CKO_01699 | -215 | 4.4 | CTAAATGATAATAAATATC |
| Proteus mirabilis HI4320 | PMI0070 | -300 | 4.1 | ACTAACGATAATTAATTTT |
|
Position: -119
Score: 4.8 Sequence: AGCAATAATAATCATTCTC
Position: -113
Score: 4.9 Sequence: AATAATCATTCTCATTCGC
Locus tag: EscherichcoliO157_010100029425
|
||||
| EscherichcoliO157_010100029425 | -119 | 4.8 | AGCAATAATAATCATTCTC | |
| -113 | 4.9 | AATAATCATTCTCATTCGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhhY | ||||
| Ortholog function: GCN5-related N-acetyltransferase | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_04861 | -119 | 4.6 | AGCAATAATAATCATTCTC |
| -113 | 4.7 | AATAATCATTCTCATTCGC | ||
|
Position: -61
Score: 4.8 Sequence: AAAAACTATTCTCATTATC
Locus tag: EscherichcoliO157_010100032506
|
||||
| EscherichcoliO157_010100032506 | -61 | 4.8 | AAAAACTATTCTCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: ferrous iron transport protein A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3408 | -138 | 3.4 | GcTgATagaAAcCATTcTC |
| -132 | 4.5 | AGAAACCATTCTCATTATC | ||
| Salmonella typhimurium LT2 | STM3505 | -140 | 3.5 | GAagATagaAAcCATTcTC |
| -133 | 4.5 | AGAAACCATTCTCATTATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04830 | -139 | 4.1 | GATGATAAAAACCATTCTC |
| -133 | 4.7 | AAAAACCATTCTCATTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03778 | -133 | 4.1 | GATGATAAAAACCATTCTC |
| -127 | 4.7 | AAAAACCATTCTCATTATC | ||
| Enterobacter sp. 638 | Ent638_3821 | -62 | 4.5 | AGAAACCATTCTCATTATC |
| Yersinia pestis KIM | y3912 | -118 | 4.1 | GAGCATGAAAATAATTCTC |
| -112 | 4.4 | GAAAATAATTCTCAGTATT | ||
| Serratia proteamaculans 568 | Spro_4628 | -155 | 4.3 | GAATACGATAATGATTCTC |
| -149 | 4.9 | GATAATGATTCTCACTATT | ||
| Edwardsiella tarda EIB202 | ETAE_3283 | -163 | 4.3 | GAAAACGATTATCAGTTTT |
| -157 | 4.1 | GATTATCAGTTTTATTATA | ||
| Proteus mirabilis HI4320 | PMI2920 | -138 | 4 | AAAGATGGTTATAATTCTC |
| -132 | 4.3 | GGTTATAATTCTCATTTGC | ||
| -59 | 4.8 | GTTAATAATTATCAGTATC | ||
| -53 | 4.6 | AATTATCAGTATCATTATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0209 | -244 | 4 | AATGTTGGTTATTATTCTC |
| -238 | 4.2 | GGTTATTATTCTCATTTGC | ||