Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AgaR regulog to Shigella flexneri 2a str. 301

Reference regulog properties
Source regulog: AgaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shigella flexneri 2a str. 301
Orthologous TF(s) SF3166
Regulated genes 2
Built upon 19 sites [see more]
Predicted regulatory interactions in Shigella flexneri 2a str. 301
Locus tag Position Score Sequence
Position: -214
Score: 5.9
Sequence: CTTTCGTTTTGTTTC
Locus tag: SF3166
SF3166 -214 5.9 CTTTCGTTTTGTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: agaR
Ortholog function: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Escherichia coli str. K-12 substr. MG1655 b3131 -34 -1.1 GAAATGAAACGAAAG
Citrobacter koseri ATCC BAA-895 CKO_04529 -35 -1.1 GAAATGAAACGAAAG
Enterobacter sp. 638 Ent638_3571 -35 -1.1 GAAATGAAACGAAAG
Position: -229
Score: 5.9
Sequence: CTTTCGTTTCATTTC
Position: -90
Score: 5.9
Sequence: CTTTCGTTTTATTTT
Locus tag: SF3167
SF3167 -229 5.9 CTTTCGTTTCATTTC
-90 5.9 CTTTCGTTTTATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: agaZ
Ortholog function: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Escherichia coli str. K-12 substr. MG1655 b3132 -229 5.9 CTTTCGTTTCATTTC
-134 5.4 CTTTCATTATGTTTC
-90 5.9 CTTTCGTTTTATTTT
Citrobacter koseri ATCC BAA-895 CKO_04530 -247 5.9 CTTTCGTTTCATTTC
-152 5.4 CTTTCATTATGTTTC
-108 5.9 CTTTCGTTTTATTTT
Enterobacter sp. 638 Ent638_3572 -230 5.9 CTTTCGTTTCATTTC
-134 5.6 CTTTCGTTATGTTTC
-90 5.9 CTTTCGTTTTATTTT