Propagation of NtrC regulog to Yersinia enterocolitica subsp. enterocolitica 8081
| Source regulog: | NtrC - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia enterocolitica subsp. enterocolitica 8081 |
| Orthologous TF(s) | YE0025 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -29
Score: 5.5 Sequence: TGCACCAAAAATGTGCA
Locus tag: YE0026
|
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| YE0026 | -29 | 5.5 | TGCACCAAAAATGTGCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ntrB | ||||
| Ortholog function: Nitrogen regulation protein NR(II) (EC 2.7.3.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3869 | -38 | 6.1 | TGCACTAAAATGGTGCA |
| Salmonella typhimurium LT2 | STM4006 | -39 | 6.1 | TGCACTAAAATGGTGCA |
| Citrobacter koseri ATCC BAA-895 | CKO_03143 | -40 | 6 | TGCACTAAATTGGTGCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04177 | -39 | 6 | TGCACTAAATTGGTGCA |
| Enterobacter sp. 638 | Ent638_4097 | -38 | 5.8 | TGCACTAAATTAGTGCA |
| Erwinia amylovora ATCC 49946 | EAM_0031 | -40 | 5.7 | TGCACTAAGTTGGTGCA |
| Yersinia pestis KIM | y3805 | -29 | 5.3 | TGCACCGAAACTGTGCA |
| Serratia proteamaculans 568 | Spro_4882 | -29 | 5.8 | TGCACTAAAAAGGTGCA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0028 | -29 | 5.2 | TGCACCATGCTGGTGCG |
| Edwardsiella tarda EIB202 | ETAE_3494 | -28 | 6.1 | TGCACCAAAATAGTGCA |
| Proteus mirabilis HI4320 | PMI2883 | -32 | 6.1 | TGCACTAAAATGGTGCA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0236 | -26 | 5.7 | TGCACCAAAAAAGTGCA |
|
Position: -274
Score: 4.7 Sequence: CGCACTGAAATGGGGCG
Position: -252
Score: 4.9 Sequence: TGCACCACAATGATGCT
Locus tag: YE1318
|
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| YE1318 | -274 | 4.7 | CGCACTGAAATGGGGCG | |
| -252 | 4.9 | TGCACCACAATGATGCT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hisJ | ||||
| Ortholog function: Histidine ABC transporter, substrate-binding component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2309 | -162 | 5.5 | TGCACTATCGTGGTGCA |
| Salmonella typhimurium LT2 | STM2354 | -211 | 4.4 | GGAACTATCACGGTGCA |
| -182 | 5.1 | TGCACCTTTTTGGTGCA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00478 | -212 | 4.3 | TTAACCATCACGGTGCG |
| -183 | 5.8 | TGCACCATCATGGTGCG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02699 | -215 | 5.3 | TGCCCCAAAAGGGTGCA |
| -185 | 4 | TGGATCATTTCAGTGCA | ||
| Enterobacter sp. 638 | Ent638_2858 | -212 | 4.1 | TTCCCTGTCACGGTGCG |
| -182 | 5.2 | TGACCCAATATGGTGCA | ||
| Yersinia pestis KIM | y1607 | -123 | 4.8 | AGCACTGAAATGGGGCA |
| Serratia proteamaculans 568 | Spro_3326 | -265 | 4.4 | CGCACTGAATTAGGGCG |
| -243 | 4.3 | TGCACCATAATGATCCC | ||
|
Position: -204
Score: 4.2 Sequence: TGCACCGTGACTGGGCA
Locus tag: YE1950
|
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| YE1950 | -204 | 4.2 | TGCACCGTGACTGGGCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rutA | ||||
| Ortholog function: Pyrimidine oxygenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1012 | -168 | 3.9 | TGCACTCTCATCGCGCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01038 | -223 | 4.1 | TGCACCCTGATTGCGCA |
| -189 | 3.8 | TGCACTGATTTTGACCA | ||
| Enterobacter sp. 638 | Ent638_1525 | -227 | 4.1 | TGCACCGCCATCGCGCA |
| Serratia proteamaculans 568 | Spro_1823 | -230 | 3.9 | TGCACCTTTAATGAGCA |
|
Position: -288
Score: 4.7 Sequence: CGCACCGCATTAGTGCG
Locus tag: YE2991
|
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| YE2991 | -288 | 4.7 | CGCACCGCATTAGTGCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltI | ||||
| Ortholog function: Glutamate-aspartate ABC transporter, substrate-binding component | ||||
| Yersinia pestis KIM | y1189 | -278 | 4.2 | TGCCTCTATTTGGTGCG |
| Serratia proteamaculans 568 | Spro_1214 | -212 | 4.8 | GGCACCATAAGGGTGCA |
| -183 | 5 | TGCATTAATTTGGTGCG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1314 | -300 | 5.3 | CGCACCAAATTGGTGCC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1307 | -239 | 4.2 | TGCACCAAAAAAATGAT |
|
Position: -263
Score: 5.1 Sequence: CGCACTATTTTGGTGCG
Locus tag: YE3120
|
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| YE3120 | -263 | 5.1 | CGCACTATTTTGGTGCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnK | ||||
| Ortholog function: nitrogen regulatory protein P-II | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0450 | -137 | 5.2 | TGCACTGTCATAGTGCG |
| Salmonella typhimurium LT2 | STM0462 | -177 | 5.2 | TGCACCGTCGTGGTGCG |
| Citrobacter koseri ATCC BAA-895 | CKO_02708 | -147 | 5.3 | TGCACCGTTATAGTGCG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00413 | -181 | 5.3 | TGCACCGTTGTGGTGCA |
| Enterobacter sp. 638 | Ent638_0918 | -160 | 5.3 | TGCACTGTCATGGTGCG |
| Erwinia amylovora ATCC 49946 | EAM_1004 | -209 | 4.7 | TGCATCATTTTAGTGCG |
| -189 | 5.1 | TGAACTATTTTGGTGCA | ||
| Yersinia pestis KIM | y1041 | -191 | 5.8 | TGCACCAACTTGGTGCG |
| Serratia proteamaculans 568 | Spro_1109 | -192 | 5.3 | CGCACCAAAGTAGTGCG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1160 | -244 | 5.8 | TGCACCAACTTAGTGCA |
| Edwardsiella tarda EIB202 | ETAE_1003 | -152 | 5.2 | TGCACCGTTTTGGTGCT |
| Proteus mirabilis HI4320 | PMI0126 | -114 | 4.7 | TGCACTAAGTTAGTGAG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3857 | -173 | 5.5 | TGCACTAATTCGGTGCA |