Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Buchnera aphidicola str. Sg (Schizaphis graminum)

Reference regulog properties
Source regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Buchnera aphidicola str. Sg (Schizaphis graminum)
Orthologous TF(s) No orthologous TFs found
Regulated genes 42
Built upon 2301 sites [see more]
Predicted regulatory interactions in Buchnera aphidicola str. Sg (Schizaphis graminum)
Locus tag Position Score Sequence
Position: -334
Score: 3.2
Sequence: AATTTTTATAGTTAGCAATTAA
Position: -303
Score: 3.3
Sequence: AATTTTTATTAAAATAATCTAA
Position: -225
Score: 3.4
Sequence: ATATATTATATATTTTAACTTT
Position: -192
Score: 3.7
Sequence: TTTTTTGTTTTCGATCAATTTT
Position: -50
Score: 3.3
Sequence: TTTTTTTATTTAAATTAATTAA
Position: -45
Score: 3.2
Sequence: TTATTTAAATTAATTAATACTT
Locus tag: BUsg033
BUsg033 -334 3.2 AATTTTTATAGTTAGCAATTAA
-303 3.3 AATTTTTATTAAAATAATCTAA
-225 3.4 ATATATTATATATTTTAACTTT
-192 3.7 TTTTTTGTTTTCGATCAATTTT
-50 3.3 TTTTTTTATTTAAATTAATTAA
-45 3.2 TTATTTAAATTAATTAATACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hupA
Ortholog function: DNA-binding protein HU-alpha (HU-2)
Escherichia coli str. K-12 substr. MG1655 b4000 -179 3.4 AAACGTGATTTAACGCCTGATT
Citrobacter koseri ATCC BAA-895 CKO_02986 -179 3.4 AAACGTGATTTAACGCCTGATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04382 -179 3.4 AAACGTGATTTACCGCCTGAAT
Enterobacter sp. 638 Ent638_0213 -179 3.5 AAACGTGATTTAACGCCTGTTT
Yersinia pestis KIM y0499 -181 3.4 AAACGTGATTTAACGCCTGATT
Serratia proteamaculans 568 Spro_0290 -181 3.4 AAACGTGATTTAACGCCTCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0238 -197 3.3 AAACGTGATTTAAGGCCTGAAA
Edwardsiella tarda EIB202 ETAE_0183 -182 3.3 AAACGTGATTTAACACCTGATT
Proteus mirabilis HI4320 PMI2771 -183 3.7 AAACGTGATTTAGTGCTTGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0492 -179 3.4 AAACGTGATTTAATGCTTTAAA
Position: -28
Score: 3.6
Sequence: ATAAATTACCTAAATAACATTA
Locus tag: BUsg044
BUsg044 -28 3.6 ATAAATTACCTAAATAACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argE
Ortholog function: acetylornithine deacetylase
Escherichia coli str. K-12 substr. MG1655 b3957 -66 3.7 TAGTGTATTTTTATTCATAAAT
Salmonella typhimurium LT2 STM4120 -66 3.9 TAATGTATTTTTATTCATAATT
Citrobacter koseri ATCC BAA-895 CKO_03037 -27 4.3 TAATGTATTTTTATTCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04246 -27 4 TATTGTATTTTTATTCAAAATA
Enterobacter sp. 638 Ent638_4029 -66 4.2 TAGTGTATTTTTATTCACATTT
Erwinia amylovora ATCC 49946 EAM_0137 -66 3.8 TATTGTATTTTTATTCACTATT
Yersinia pestis KIM y0309 -223 3.6 TATTTTTATTTATGTCAATAAA
Serratia proteamaculans 568 Spro_4782 -71 4.3 TATTGTATTTTTATTCACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0191 -65 4 TATTGTATTTTTATTCAAAATA
Edwardsiella tarda EIB202 ETAE_3483 -65 3.9 TATTGTATTTTTATTCATAATT
Proteus mirabilis HI4320 PMI3236 -65 3.9 TAATGTATTTTTATTCAAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4745 -65 3.9 TAATGTATTTTTATTCAAAAAA
Position: -157
Score: 3.7
Sequence: TAATGTTATTTAGGTAATTTAT
Position: -122
Score: 3.8
Sequence: GATTATGATGTATTTTAAATAT
Locus tag: BUsg045
BUsg045 -157 3.7 TAATGTTATTTAGGTAATTTAT
-122 3.8 GATTATGATGTATTTTAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Salmonella typhimurium LT2 STM4121 -44 3.5 AATTATGAATAAAAATACATTA
Citrobacter koseri ATCC BAA-895 CKO_03036 -110 4 ATTTGTGAATAAAAATACATTA
Enterobacter sp. 638 Ent638_4028 -44 3.8 AAATGTGAATAAAAATACACTA
Yersinia pestis KIM y0310 -43 3.7 TTTATTGACATAAATAAAAATA
Serratia proteamaculans 568 Spro_4781 -167 4 TATTGTGAATAAAAATACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0192 -159 3.5 TATTTTGAATAAAAATACAATA
Edwardsiella tarda EIB202 ETAE_3482 -160 3.4 AATTATGAATAAAAATACAATA
Proteus mirabilis HI4320 PMI3237 -57 3.6 TTTTTTGAATAAAAATACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu4744 -59 3.6 TTTTTTGAATAAAAATACATTA
Position: -4
Score: 3.6
Sequence: TATTATGAATAATTTTAAAAAA
Locus tag: BUsg047
BUsg047 -4 3.6 TATTATGAATAATTTTAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: Argininosuccinate synthase (EC 6.3.4.5)
Escherichia coli str. K-12 substr. MG1655 b3172 -253 4.6 TATAGTGATCCACGCCACATTT
Erwinia amylovora ATCC 49946 EAM_0139 -121 3.5 AATAGTGAATAAAAATACAATA
Serratia proteamaculans 568 Spro_4779 -167 4 TATTGTGAATAAAAATACAATA
Edwardsiella tarda EIB202 ETAE_3480 -160 3.4 AATTATGAATAAAAATACAATA
Proteus mirabilis HI4320 PMI3239 -57 3.6 TTTTTTGAATAAAAATACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu4742 -59 3.6 TTTTTTGAATAAAAATACATTA
Position: -158
Score: 3.9
Sequence: TTTTGTATTTTTTTTCAAAAAA
Locus tag: BUsg100
BUsg100 -158 3.9 TTTTGTATTTTTTTTCAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gnd
Ortholog function: hypothetical protein
Enterobacter sp. 638 Ent638_2642 -116 4 CAGTGTGACATAGATCAGCAAA
Yersinia pestis KIM y2629 -78 3.8 AGTTGTGCTATCTATCGCACCA
-76 3.6 TTGTGCTATCTATCGCACCAAT
Serratia proteamaculans 568 Spro_1608 -297 3.7 ATGCTTGAAGTGGCTCTCACTT
-72 4.2 ACATGTGTGCCACATCACAAAA
Proteus mirabilis HI4320 PMI0655 -71 4.7 CTATGTGATCAGGTTAACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1560 -74 4.4 ACATGTGATCACATTAACAAAT
Position: -296
Score: 4.2
Sequence: AATTGTGATATTATAAAAAATA
Position: -115
Score: 3.7
Sequence: TATATTGATTAATTTTAAAAAT
Locus tag: BUsg116
BUsg116 -296 4.2 AATTGTGATATTATAAAAAATA
-115 3.7 TATATTGATTAATTTTAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroH
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Escherichia coli str. K-12 substr. MG1655 b1704 -106 4.3 AGGTGTGACACACCTCGCACTT
-64 4 TATCGTGATGCGCATCACTTCC
Salmonella typhimurium LT2 STM1347 -106 4.3 AGGTGTGACACGCCTCGCACTT
-64 4 TATCGTGATGCCCATCACTTCC
Citrobacter koseri ATCC BAA-895 CKO_01728 -115 4.3 AGGTGTGAAACGCCTCGCATTT
-64 4.3 TATTGTGATGCCCATCACTTCC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02162 -63 4 TATCGTGATGCGCATCACTTCC
Enterobacter sp. 638 Ent638_1743 -126 3.6 AGTTATGATCGCTTTCACTCTC
-62 3.6 TAAGGTGATGCCCATCACTTCC
Yersinia pestis KIM y1928 -64 4.3 TATTGTGATCGCCATCACTTCC
Serratia proteamaculans 568 Spro_2172 -135 3.9 TTTTGTGCTTTTTTTAGCGATT
-64 4.3 TATTGTGATCGCCATCACTTCC
Edwardsiella tarda EIB202 ETAE_1792 -63 4 TATCGTGATCCCCATCACTTCC
Proteus mirabilis HI4320 PMI1423 -55 3.9 TATTGTGATCTTAATCACTGGG
Photorhabdus luminescens subsp. laumondii TTO1 plu2630 -62 3.8 TATTGTAATTTCCATTATCTAT
Position: -4
Score: 4.3
Sequence: AATTATGATTAAAATCACTAAA
Locus tag: BUsg129
BUsg129 -4 4.3 AATTATGATTAAAATCACTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: folE
Ortholog function: GTP cyclohydrolase I
Escherichia coli str. K-12 substr. MG1655 b2153 -101 3.8 TTATGTGCGCCGCCTCACGCAC
Salmonella typhimurium LT2 STM2193 -101 4 TTATGTGCGCTACCTCACGCAC
Citrobacter koseri ATCC BAA-895 CKO_00638 -98 3.8 TTATGTGCGCCGCCTCACGCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02591 -84 3.5 TTCTGTGCGCCACCTCACGCAC
Enterobacter sp. 638 Ent638_2753 -84 3.9 TTATGTGCGCCACCTCACGCAC
Serratia proteamaculans 568 Spro_1560 -121 4.3 AATCTTGACCGGGTTCACGTTA
Proteus mirabilis HI4320 PMI0639 -86 4.9 TAATGTGATTCAGCTCATCTAA
Position: 13
Score: 3.6
Sequence: TAATGTTAATTCCTTTAAACAA
Locus tag: BUsg170
BUsg170 13 3.6 TAATGTTAATTCCTTTAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pta
Ortholog function: phosphate acetyltransferase
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02688 -95 3.8 AGGCATGATGTTAATCATAAAT
Enterobacter sp. 638 Ent638_2841 -96 3.8 TGGCATGATGTTAATCATAAAT
Serratia proteamaculans 568 Spro_3317 -125 3.8 TCACATGATGTTAATCATAAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3040 -95 4.2 AGGTATGATGTTAATCATAAAT
Proteus mirabilis HI4320 PMI1772 -123 3.6 AAGCATGATGCGTATCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3096 -121 3.6 TAGCATGATGTTAATCATTTAA
Position: -329
Score: 3.9
Sequence: ATCTGTGATAACATTAATAATA
Locus tag: BUsg188
BUsg188 -329 3.9 ATCTGTGATAACATTAATAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Escherichia coli str. K-12 substr. MG1655 b0002 -83 3.8 TTTATTGACTTAGGTCACTAAA
Salmonella typhimurium LT2 STM0002 -103 4.2 GAATGTGATCAATTTAAAAATT
Citrobacter koseri ATCC BAA-895 CKO_03385 -249 4.1 GAATGTGATCAAATTAAAAATT
Enterobacter sp. 638 Ent638_0564 -252 4.4 AATTGTGATCAAATTAGAAATT
Proteus mirabilis HI4320 PMI0001 -232 3.9 AAATTTGACATCTCTCTCGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0563 -223 4.2 ATGTTTGACTTTGCGCACAAAT
Position: -179
Score: 4.6
Sequence: TAGTTTGATTTTTATAACATAA
Position: -149
Score: 3.6
Sequence: ATTAGTGCAATAGTTAAAAATA
Locus tag: BUsg189
BUsg189 -179 4.6 TAGTTTGATTTTTATAACATAA
-149 3.6 ATTAGTGCAATAGTTAAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hpt
Ortholog function: hypoxanthine phosphoribosyltransferase
Escherichia coli str. K-12 substr. MG1655 b0125 -147 5.3 ATGTGTGATCGTCATCACAATT
Salmonella typhimurium LT2 STM0170 -147 5.3 ATGTGTGATCGTCATCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_03242 -135 5.3 AAGTGTGATCGTCATCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00133 -134 5.4 AAGTGTGATCGGAATCACAAAT
Enterobacter sp. 638 Ent638_0673 -180 3.6 AATTTTGATAGCAATTAATTAT
-148 5.4 AAGTGTGATCGGAATCACAAAT
Proteus mirabilis HI4320 PMI0160 -154 3.6 TACTGTAATAAGTAACAAAATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0860 -144 4 AATTCTGATATGCTTTGCAAAA
Position: -218
Score: 3.2
Sequence: TTTTGTTAAAAAGTTAAATAAA
Position: -190
Score: 3.1
Sequence: AAAATTAATTATACTCATAGTT
Position: -165
Score: 3.5
Sequence: TTTATTGATTTTTTTTAGAAAA
Position: -128
Score: 3.2
Sequence: AATTTTTATTTTTGTAGTAAAT
Position: -121
Score: 3.9
Sequence: ATTTTTGTAGTAAATCAAAATT
Position: -102
Score: 3.2
Sequence: ATTATTTAATTATATAAAATTA
Position: -75
Score: 3.2
Sequence: TAATATTACAATAATAATATTT
Locus tag: BUsg199
BUsg199 -218 3.2 TTTTGTTAAAAAGTTAAATAAA
-190 3.1 AAAATTAATTATACTCATAGTT
-165 3.5 TTTATTGATTTTTTTTAGAAAA
-128 3.2 AATTTTTATTTTTGTAGTAAAT
-121 3.9 ATTTTTGTAGTAAATCAAAATT
-102 3.2 ATTATTTAATTATATAAAATTA
-75 3.2 TAATATTACAATAATAATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceE
Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Escherichia coli str. K-12 substr. MG1655 b0114 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0152 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03259 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00118 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0660 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0747 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0767 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4011 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3789 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0659 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2046 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -40
Score: 3.6
Sequence: AAATATAGTATCGATCAAATAT
Locus tag: BUsg258
BUsg258 -40 3.6 AAATATAGTATCGATCAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lipB
Ortholog function: Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase
Escherichia coli str. K-12 substr. MG1655 b0630 -94 3.6 AAGTGTAATTTCCGTCCCCATA
Salmonella typhimurium LT2 STM0635.S -93 4.2 AAGTGTGATTTTCGTCCCCATA
-35 3.9 AGTTGTTATTTTTTTTACGTAA
Citrobacter koseri ATCC BAA-895 CKO_02528 -91 4.4 AAGTGTGATTTCCATCCCCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00662 -97 4.4 AAGTGTGATTTCCATCCCCATA
Enterobacter sp. 638 Ent638_1165 -90 4.4 AAGTGTGATTTCCATCCCCATA
Yersinia pestis KIM y1173 -146 4.2 TATTGTGATTAATCTTATATTG
Position: -40
Score: 4.1
Sequence: ATGTTTGATATTTATCTTATTT
Locus tag: BUsg278
BUsg278 -40 4.1 ATGTTTGATATTTATCTTATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glyA
Ortholog function: serine hydroxymethyltransferase
Escherichia coli str. K-12 substr. MG1655 b2551 -229 3.8 GAATGTGATGAAGTGAAAAATT
Proteus mirabilis HI4320 PMI1867 -210 3.8 TAGCGAGATGTGCCTCAAAAAG
Photorhabdus luminescens subsp. laumondii TTO1 plu3291 -178 3.8 TAGCGTAATTTTCATTACACTA
Position: -27
Score: 3.2
Sequence: TTATTTTAATTAGAGCGTATTT
Position: -10
Score: 3.2
Sequence: TATTTTTATTATGCAAAAATTT
Locus tag: BUsg301
BUsg301 -27 3.2 TTATTTTAATTAGAGCGTATTT
-10 3.2 TATTTTTATTATGCAAAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroA
Ortholog function: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Escherichia coli str. K-12 substr. MG1655 b0908 -155 4.8 TTGTGTGATGCAAGCCACATTT
Salmonella typhimurium LT2 STM0978 -142 4.2 TTGTGTGACGCATGCCGCATTT
Citrobacter koseri ATCC BAA-895 CKO_02164 -171 4.6 TTGTGTGACGTAGCGCGCATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00936 -145 3.7 TTGTGTGACGGCGGCCGCGTTT
Enterobacter sp. 638 Ent638_1428 -119 4.4 TTGTGTGACGGTGGACACATTT
Yersinia pestis KIM y2783 -39 3.3 TATAACGATGGCAATCTCAGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2593 -78 3.5 AAGTATGACGGGTATAAAAATG
Edwardsiella tarda EIB202 ETAE_2177 -104 3.8 TATAGTGACAGCGCTCAATAAA
Position: -181
Score: 3.7
Sequence: AAAAGTGCAAAAACTCAAATAA
Position: 29
Score: 3.6
Sequence: TCTAGTGATTTTTGGAACAAAA
Locus tag: BUsg312
BUsg312 -181 3.7 AAAAGTGCAAAAACTCAAATAA
29 3.6 TCTAGTGATTTTTGGAACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: zwf
Ortholog function: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Escherichia coli str. K-12 substr. MG1655 b1852 -208 3.9 TAACATGATCAGTGTCAGATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02367 -225 3.8 TTACATGATCAGGGTCGTATTT
Yersinia pestis KIM y2244 -231 4.1 TAATATGACCTGTGTCTAATTT
Proteus mirabilis HI4320 PMI1157 -225 3.7 AAGTATGACCTGTGTCTAACTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2122 -234 4.2 TAATTTAATGTTTTTCATAAAA
Position: -105
Score: 4.5
Sequence: TAATTTGAGCCGGTTCACAACT
Locus tag: BUsg360
BUsg360 -105 4.5 TAATTTGAGCCGGTTCACAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: deaD
Ortholog function: ATP-independent RNA helicase
Salmonella typhimurium LT2 STM3280.S -154 3.9 CTTTTTGATTGCCATCACCTTC
-99 4.4 TACTTTGAGCCGGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_04559 -103 3.9 CTTTTTGATTGCCATCACCTTC
-48 4.4 TACTTTGAGCCGGTTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03570 -154 3.8 TTTTTTGCTTGCCATCACCTTC
-99 4.4 TACTTTGAGCCGGTTCACACAT
Enterobacter sp. 638 Ent638_3599 -154 4.1 TCTTATGATTGCCATCACCTTA
-99 4.4 TACTTTGAGCCGGTTCACACTT
Erwinia amylovora ATCC 49946 EAM_3065 -99 4.8 TAATTTGAGCCGGTTCACACTT
Yersinia pestis KIM y0696 -96 4.8 TAATTTGAGCCGGTTCACACTT
Serratia proteamaculans 568 Spro_0495 -96 4.8 TAATTTGAGCCGGTTCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0718 -96 4.4 CAATTTGAGCCGGTTCACACTT
Edwardsiella tarda EIB202 ETAE_0411 -96 4.8 TAATTTGAGCCGGTTCACACTT
Proteus mirabilis HI4320 PMI3424 -80 5 TAATTTGAGCCAGTTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4523 -95 5 TAATTTGAGCCAGTTCACATTT
Position: -293
Score: 3.2
Sequence: TTTTTTAACTTGTTGAAAATTT
Position: -219
Score: 3.5
Sequence: TATACTGATTATTATAAAAATT
Position: -201
Score: 3.5
Sequence: AATTATTTTTTTTATCATATTA
Position: -182
Score: 4.3
Sequence: TTATTTTATCTTTTTCAAAATT
Position: -134
Score: 3.2
Sequence: ATTTTTTATTTTAAATACATAC
Position: -98
Score: 3.5
Sequence: ATTTTTAATAATATTCTAAATT
Position: -44
Score: 3.2
Sequence: TATTTTTTAATATTTCATAATT
Locus tag: BUsg393
BUsg393 -293 3.2 TTTTTTAACTTGTTGAAAATTT
-219 3.5 TATACTGATTATTATAAAAATT
-201 3.5 AATTATTTTTTTTATCATATTA
-182 4.3 TTATTTTATCTTTTTCAAAATT
-134 3.2 ATTTTTTATTTTAAATACATAC
-98 3.5 ATTTTTAATAATATTCTAAATT
-44 3.2 TATTTTTTAATATTTCATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: metK
Ortholog function: S-adenosylmethionine synthetase (EC 2.5.1.6)
Escherichia coli str. K-12 substr. MG1655 b2942 -200 3.6 GAATGAGACACGATTCAAAAAA
Salmonella typhimurium LT2 STM3090 -200 3.9 CATTGCGACGGCCTTCAAAAAA
Citrobacter koseri ATCC BAA-895 CKO_04317 -199 3.5 CAACGAGAGTTGATTCAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03375 -199 4.3 AAATGCGACCGCCATCAAAAAA
Enterobacter sp. 638 Ent638_3346 -199 4.4 TAATGCGAGCGATATCAAAAAA
Proteus mirabilis HI4320 PMI2095 -275 3.5 CACTGTGATTCAGTTTTCACAG
Photorhabdus luminescens subsp. laumondii TTO1 plu3683 -205 3.3 GTTTATACTCGCAATCACATAA
Position: -114
Score: 3.8
Sequence: TTTTTTTATTTTGATAAAACTA
Position: -84
Score: 3.9
Sequence: AATTGTTAATTTAATGACATTA
Locus tag: BUsg397
BUsg397 -114 3.8 TTTTTTTATTTTGATAAAACTA
-84 3.9 AATTGTTAATTTAATGACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpiA
Ortholog function: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03349 -82 3.9 TTGTGTGATCTGCATCGCAGGG
Enterobacter sp. 638 Ent638_3333 -47 3.8 TAATGTGACACCGGTCACAGGG
Yersinia pestis KIM y3302 -114 4.2 AACTGTGATCTCGCTAGAATTA
Edwardsiella tarda EIB202 ETAE_2950 -276 4 TTTTGTTATGTATAAAACGTTA
Proteus mirabilis HI4320 PMI2032 -96 3.8 TAAAATGTTGTGTCTCAAATTT
Position: -198
Score: 3.7
Sequence: TAGCTTAATTTTTTTCAAATAA
Position: -80
Score: 4
Sequence: TTTTATGATGAAAATCATTTAT
Locus tag: BUsg473
BUsg473 -198 3.7 TAGCTTAATTTTTTTCAAATAA
-80 4 TTTTATGATGAAAATCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cspE
Ortholog function: cold shock protein E
Escherichia coli str. K-12 substr. MG1655 b0623 -114 4 TAACGCGACTTTTATCACTTTT
Salmonella typhimurium LT2 STM0629 -114 4.3 TAACGCGATATTTATCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_02534 -21 4.3 TAACGCGATATTTATCACTTTT
Enterobacter sp. 638 Ent638_1159 -114 3.8 TAACGCGACTTTTGTCACTTTT
Erwinia amylovora ATCC 49946 EAM_1116 -113 3.6 AAAAACGATATTTATCACTTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1294 -113 3.9 TTTAGCGACTTTTATCACTTTT