Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YiaJ regulog to Escherichia coli 53638

Reference regulog properties
Source regulog: YiaJ - Enterobacteriales
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor
Biological process: L-lyxose utilization
Effector: Ascorbate-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli 53638
Orthologous TF(s) Ecol5_01000022
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Escherichia coli 53638
Locus tag Position Score Sequence
Position: -70
Score: 6.4
Sequence: ATTTGAAATCAAGTTTCGCAT
Locus tag: Ecol5_01000021
Ecol5_01000021 -70 6.4 ATTTGAAATCAAGTTTCGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiaK
Ortholog function: 2,3-diketo-L-gulonate dehydrogenase, NADH-dependent
Escherichia coli str. K-12 substr. MG1655 b3575 -70 6.4 ATTTGAAATCAAGTTTCGCAT
Salmonella typhimurium LT2 STM3668 -82 6 ATTTGGAACTAGATTTCGCAT
Citrobacter koseri ATCC BAA-895 CKO_05033 -72 6.5 ATTTGAAATCAGATTTCGCAT
Serratia proteamaculans 568 Spro_3933 -74 6.1 ATTTGAAATGCAATTCCGCAT
Position: -151
Score: 6.3
Sequence: ATGCGAAACTTGATTTCAAAT
Locus tag: Ecol5_01000022
Ecol5_01000022 -151 6.3 ATGCGAAACTTGATTTCAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiaJ
Ortholog function: transcriptional regulator of L-lyxose catabolism, IclR family
Escherichia coli str. K-12 substr. MG1655 b3574 -151 6.3 ATGCGAAACTTGATTTCAAAT
Salmonella typhimurium LT2 STM3667 -168 6.2 ATGCGAAATCTAGTTCCAAAT
Citrobacter koseri ATCC BAA-895 CKO_05032 -167 6.5 ATGCGAAATCTGATTTCAAAT
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