Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GntR regulog to Escherichia coli O157:H7 str. EC4042

Reference regulog properties
Source regulog: GntR - Enterobacteriales  
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli O157:H7 str. EC4042
Orthologous TF(s) EschercoliO157_010100002885
Regulated genes 3
Built upon 61 sites [see more]
Predicted regulatory interactions in Escherichia coli O157:H7 str. EC4042
Locus tag Position Score Sequence
Position: -100
Score: 6.4
Sequence: CAATGTTACCGATAACAGTT
Locus tag: EschercoliO157_010100002895
EschercoliO157_010100002895 -100 6.4 CAATGTTACCGATAACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12)
Escherichia coli str. K-12 substr. MG1655 b3437 -61 6.4 CAATGTTACCGATAACAGTT
-48 5.8 AACAGTTACCCGTAACATTT
Position: -178
Score: 5.9
Sequence: AGATGTTACCCGTATCATTC
Locus tag: EschercoliO157_010100003070
EschercoliO157_010100003070 -178 5.9 AGATGTTACCCGTATCATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntT
Ortholog function: High-affinity H+/gluconate symporter
Escherichia coli str. K-12 substr. MG1655 b3415 -178 5.9 AGATGTTACCCGTATCATTC
-37 4.9 TGACGTTACCCATAACAAAT
Salmonella typhimurium LT2 STM3512 -178 6 ATATGTTACCCGTATCATTC
-37 4.7 TGACGTTACCCATAACAAAG
Citrobacter koseri ATCC BAA-895 CKO_04836 -178 6 ATATGTTACCCGTATCATTC
-37 4.9 CGACGTTACCCATAACAAAT
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