Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AraC regulog to Escherichia coli O157:H7 str. EC4045

Reference regulog properties
Source regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Propagated regulon:
Target genome Escherichia coli O157:H7 str. EC4045
Orthologous TF(s) EschericoliO157_010100009317
Regulated genes 2
Built upon 56 sites [see more]
Predicted regulatory interactions in Escherichia coli O157:H7 str. EC4045
Locus tag Position Score Sequence
Position: -173
Score: 8.7
Sequence: TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
Locus tag: EschericoliO157_010100009312
EschericoliO157_010100009312 -173 8.7 TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araB
Ortholog function: Ribulokinase (EC 2.7.1.16)
Citrobacter koseri ATCC BAA-895 CKO_03319 -174 8.3 TAACAAAAGTGTCTATA-(4)-CGACAGAAATGTCCACA
-100 8.1 TAGCATTTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Enterobacter sp. 638 Ent638_0610 -172 8.6 TAACAAAAGTGTCTATA-(4)-CGGCAGAAATGTCCACA
-98 8.1 CAGCAATTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Escherichia coli str. K-12 substr. MG1655 b0063 -173 8.7 TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
-99 8 TAGCATTTTTATCCATA-(4)-TAGCGGATCCTACCTGA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00062 -172 8.7 TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
-98 8.5 CAGCAAAATAATCCATA-(4)-TAGCGAATCCGGCCTGA
Salmonella typhimurium LT2 STM0103 -173 8.4 TAACAGAAGTGTCTATA-(4)-TGGCTGGAATGTCCACA
-99 8.1 TAGCATTTTTGTCCATA-(4)-TAGCGGATCCTGCCTGA
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