Propagation of PurR regulog to Providencia alcalifaciens DSM 30120

Reference regulog properties
Source regulog:	PurR - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Purine metabolism
Effector:	Hypoxanthine; Guanine
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Providencia alcalifaciens DSM 30120
Orthologous TF(s)	PROVALCAL_03145
Regulated genes	13

Built upon 313 sites [see more]

Predicted regulatory interactions in *Providencia alcalifaciens DSM 30120*
	Locus tag	Position	Score	Sequence
Position: -81 Score: 4.2 Sequence: ATTTAATCGTTTTCGT Locus tag: PROVALCAL_00951
	PROVALCAL_00951	-81	4.2	ATTTAATCGTTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pyrC
Ortholog function: dihydroorotase
Escherichia coli str. K-12 substr. MG1655	b1062	-67	4.3	AGGAAAACGTTTCCGC
Salmonella typhimurium LT2	STM1163	-65	4.6	ACGAAAACGTTTCCGC
Citrobacter koseri ATCC BAA-895	CKO_02001	-66	4.6	ACGAAAACGTTTCCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01074	-77	4.9	AGGAAAACGTTTACGC
Enterobacter sp. 638	Ent638_1576	-82	5.1	ACGAAAACGTTTACGC
Proteus mirabilis HI4320	PMI1678	-99	4.2	ATTTAATCGTTTTCGT
		-48	3.8	ATCCAATCGTTGATCT

Position: -173 Score: 4.4 Sequence: AAGCAATCGTTTGTAT Locus tag: PROVALCAL_01072
	PROVALCAL_01072	-173	4.4	AAGCAATCGTTTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serA
Ortholog function: D-3-phosphoglycerate dehydrogenase
Escherichia coli str. K-12 substr. MG1655	b2913	-95	4.5	ACGCAAACGTTCATAT
Salmonella typhimurium LT2	STM3062	-102	4.2	GCGCAAACGTTCATAT
Citrobacter koseri ATCC BAA-895	CKO_04278	-105	4.5	ACGCAAACGTTCATAT
		-87	4.3	CCGCAATAGTTTTTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03348	-99	4.5	ACGCAAACGTTCATAT
Enterobacter sp. 638	Ent638_3332	-100	4.5	ACGCAAACGTTCATAT
Erwinia amylovora ATCC 49946	EAM_2798	-213	4.8	AGGCAATCGTTTTTAT
Yersinia pestis KIM	y3301	9	4.4	AGGCAATCGTTTGTAT
Serratia proteamaculans 568	Spro_3923	-99	4.1	GGGCAATCGTTTGTAT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3905	-98	4.4	AAGCAATCGTTTGTAT
Proteus mirabilis HI4320	PMI2031	-94	4	GTGCAATCGGTTGTAT
Photorhabdus luminescens subsp. laumondii TTO1	plu3605	-91	4.3	TAGCAATCGTTTATAT

Position: -123 Score: 4.9 Sequence: AAGTAATCGTTTACGT Locus tag: PROVALCAL_01366
	PROVALCAL_01366	-123	4.9	AAGTAATCGTTTACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjcD
Ortholog function: putative xanthine/uracil permease
Proteus mirabilis HI4320	PMI3524	-120	4.7	AAACAAACGTTTGCTT
		-54	5.2	ACGTAATCGTTTTCGT
Photorhabdus luminescens subsp. laumondii TTO1	plu4423	-114	4.3	AGCCAAACGATTGCTT
		-41	4.9	AGGTAATCGTTTTCGT

Position: -122 Score: 5.2 Sequence: ATGCAATCGTTTGCGT Locus tag: PROVALCAL_01703
	PROVALCAL_01703	-122	5.2	ATGCAATCGTTTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glyA
Ortholog function: serine/glycine hydroxymethyltransferase
Escherichia coli str. K-12 substr. MG1655	b2551	-134	4.5	AGGTAATCGTTTGCGT
Salmonella typhimurium LT2	STM2555	-132	4.5	AGGTAATCGTTTGCGT
Citrobacter koseri ATCC BAA-895	CKO_00237	-126	4.5	AGGTAATCGTTTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02876	-133	4.5	AGCCAATCGTTTGCGT
Enterobacter sp. 638	Ent638_3036	-131	4.7	AGGTAAACGTTTGCGT
Erwinia amylovora ATCC 49946	EAM_2497	-129	4.5	AGCCAATCGTTTGCGT
Yersinia pestis KIM	y1322	-324	4.5	AGCCAATCGTTTGCGT
Serratia proteamaculans 568	Spro_3638	-135	4	TGCCAATCGTTTGCGT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3250	-152	3.8	AGCTAATCGTTTGCGT
Edwardsiella tarda EIB202	ETAE_2821	-147	4	TGCCAAACGATTGCGT
Proteus mirabilis HI4320	PMI1867	-128	4.7	TAGCAAACGATTGCGT
Photorhabdus luminescens subsp. laumondii TTO1	plu3291	-126	5.2	ATGCAATCGTTTGCGT

Position: -100 Score: 5.9 Sequence: ACGCAAACGGTTTCGT Locus tag: PROVALCAL_01718
	PROVALCAL_01718	-100	5.9	ACGCAAACGGTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purL
Ortholog function: phosphoribosylformylglycinamidine synthase
Escherichia coli str. K-12 substr. MG1655	b2557	-92	5.9	ACGCAAACGGTTTCGT
Salmonella typhimurium LT2	STM2565	-90	5.9	ACGCAAACGGTTTCGT
Citrobacter koseri ATCC BAA-895	CKO_00226	29	5.9	ACGCAAACGGTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02882	-91	5.9	ACGCAAACGGTTTCGT
Enterobacter sp. 638	Ent638_3042	-101	5.9	ACGCAAACGGTTTCGT
Erwinia amylovora ATCC 49946	EAM_2502	-104	5.6	GCGCAAACGGTTTCGT
Yersinia pestis KIM	y1309	-130	5.9	ACGCAAACGGTTTCGT
Serratia proteamaculans 568	Spro_3654	-113	5.9	ACGCAAACGGTTTCGT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3258	-113	5.9	ACGCAAACGGTTTCGT
Edwardsiella tarda EIB202	ETAE_0774	-116	5.9	ACGCAAACGGTTTCGT
Proteus mirabilis HI4320	PMI1875	-98	5.9	ACGCAAACGGTTTCGT
Photorhabdus luminescens subsp. laumondii TTO1	plu3317	-91	5.9	ACGCAAACGGTTTCGT

Position: -236 Score: 4.5 Sequence: AAGTAATCGTTTGCGT Locus tag: PROVALCAL_01943
	PROVALCAL_01943	-236	4.5	AAGTAATCGTTTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purC
Ortholog function: phosphoribosylaminoimidazole-succinocarboxamidesynthase
Escherichia coli str. K-12 substr. MG1655	b2476	-169	5	ACGCAAACGTGTGCGT
Salmonella typhimurium LT2	STM2487	-131	5	ACGCAAACGTGTGCGT
Citrobacter koseri ATCC BAA-895	CKO_00311	-145	5	ACGCAAACGTGTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02810	-187	5	ACGCAAACGTGTGCGT
Enterobacter sp. 638	Ent638_2972	-68	5	ACGCAAACGTGTGCGT
Erwinia amylovora ATCC 49946	EAM_2430	-151	4.6	ACGTAAACGATTGCTT
Serratia proteamaculans 568	Spro_3507	-88	4.1	ACGGTATCGTTTGCGT
Edwardsiella tarda EIB202	ETAE_1098	-97	4.5	ACGCAATCGTTTGGCT

Position: -68 Score: 4.8 Sequence: TCGCAAACGTTTGCGG Locus tag: PROVALCAL_01955
	PROVALCAL_01955	-68	4.8	TCGCAAACGTTTGCGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: purM
Ortholog function: phosphoribosylformylglycinamidine cyclo-ligase
Escherichia coli str. K-12 substr. MG1655	b2499	-79	5.1	TCGCAAACGTTTGCTT
Salmonella typhimurium LT2	STM2499.S	-63	5.1	TCGCAAACGTTTGCTT
Citrobacter koseri ATCC BAA-895	CKO_00291	-299	5.1	TCGCAAACGTTTGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02824	-74	5.1	TCGCAAACGTTTGCTT
Enterobacter sp. 638	Ent638_2988	-79	4.9	TCGCAAACGTTTGCCT
Erwinia amylovora ATCC 49946	EAM_2441	-84	5.1	TCGCAAACGTTTGCTT
Yersinia pestis KIM	y1407	-242	4.9	TCGCAAACGTTTGCCT
Serratia proteamaculans 568	Spro_3524	-59	4.9	TCGCAAACGTTTGCCT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1254	-129	4.6	TCGCAAACGATTGCCT
Edwardsiella tarda EIB202	ETAE_1086	-116	4.9	TAGCAAACGTTTGCTT
Proteus mirabilis HI4320	PMI1575	-79	5.1	TCGCAAACGTTTGCTT
Photorhabdus luminescens subsp. laumondii TTO1	plu2760	-80	5.1	TCGCAAACGTTTGCTT

Position: -97 Score: 5.7 Sequence: ACGCAAACGTTTTCCT Locus tag: PROVALCAL_02321
	PROVALCAL_02321	-97	5.7	ACGCAAACGTTTTCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purE
Ortholog function: phosphoribosylaminoimidazole carboxylase catalytic subunit
Escherichia coli str. K-12 substr. MG1655	b0523	-87	5.5	ACGCAACCGTTTTCCT
Salmonella typhimurium LT2	STM0534	-87	5.5	ACGCAACCGTTTTCCT
Citrobacter koseri ATCC BAA-895	CKO_02635	-87	5.5	ACGCAACCGTTTTCCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00478	-88	5.5	ACGCAACCGTTTTCCT
Enterobacter sp. 638	Ent638_0977	-86	5.5	ACGCAACCGTTTTCCT
Erwinia amylovora ATCC 49946	EAM_1060	-111	5.5	ACGCAACCGTTTTCCT
Yersinia pestis KIM	y1103	-116	5.5	ACGCAACCGTTTTCCT
Serratia proteamaculans 568	Spro_1163	-108	5.5	ACGCAACCGTTTTCCT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3156	-130	5.5	ACGCAACCGTTTTCCT
Edwardsiella tarda EIB202	ETAE_2700	-114	5.7	ACGCAAACGTTTTCCT
Proteus mirabilis HI4320	PMI2161	-91	5.7	ACGCAAACGTTTTCCT
Photorhabdus luminescens subsp. laumondii TTO1	plu3807	-99	5.5	ACGCAATCGTTTTCCT

Position: -65 Score: 5.1 Sequence: GCGCAAACGATTGCTT Locus tag: PROVALCAL_02668
	PROVALCAL_02668	-65	5.1	GCGCAAACGATTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xanP
Ortholog function: xanthine/uracil permease, NCS2 family
Escherichia coli str. K-12 substr. MG1655	b3654	-68	4.8	TGGCAAACGTTTGCTT
		30	4.9	GCGCAACCGGTTGCGC
Salmonella typhimurium LT2	STM3747	-68	4.9	TCGCAATCGTTTGCTT
		30	4.9	GCGCAACCGGTTGCGC
Citrobacter koseri ATCC BAA-895	CKO_05111	-53	5.1	ATGCAATCGTTTGCTT
		45	4.9	GCGCAACCGGTTGCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04013	-68	4.8	TGGCAAACGTTTGCTT
		30	4.9	GCGCAACCGGTTGCGC
Enterobacter sp. 638	Ent638_0073	-68	4.9	TCGCAACCGTTTGCTT
		30	4.8	GCGCAACCGATTGCGC
Erwinia amylovora ATCC 49946	EAM_0040	-69	4.6	TAGCAAACGATTGCTT
Yersinia pestis KIM	y0107	-18	5.1	GCGCAAACGATTGCTT
Serratia proteamaculans 568	Spro_4873	-70	5.1	GCGCAACCGTTTGCTT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0035	-74	4.9	TAGCAAACGTTTGCTT
Edwardsiella tarda EIB202	ETAE_0025	-70	5.3	ACGCAAACGATTGCTT
Proteus mirabilis HI4320	PMI2868	-68	5.3	ACGCAAACGATTGCTT
Photorhabdus luminescens subsp. laumondii TTO1	plu0247	-68	5.3	ACGCAAACGATTGCTT

Position: -186 Score: 4.6 Sequence: CCGCCATCGTTTTCTT Position: -119 Score: 5.8 Sequence: ACGCAATCGTTTTCTT Locus tag: PROVALCAL_02710
	PROVALCAL_02710	-186	4.6	CCGCCATCGTTTTCTT
		-119	5.8	ACGCAATCGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purP
Ortholog function: high affinity adenine permease
Escherichia coli str. K-12 substr. MG1655	b3714	-147	3.7	AGTTTAACGTTTTCGT
		-115	4.9	ACGCAATCGTTGCCGT
Salmonella typhimurium LT2	STM3851.S	-118	4.9	ACGCAATCGTTGCCGT
Citrobacter koseri ATCC BAA-895	CKO_00059	-148	3.7	AGTTTAACGTTTTCGT
		-116	4.9	ACGCAATCGTTGCCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04124	-151	3.7	AGTTTAACGTTTTCGT
		-119	4.9	ACGCAATCGTTGCCGT
Enterobacter sp. 638	Ent638_4143	-115	4.9	ACGCAATCGTTGCCGT
Erwinia amylovora ATCC 49946	EAM_3460	-99	4.8	GCGCAATCGGTTGCGA
Serratia proteamaculans 568	Spro_0021	87	4	ACGGAAACGATTGCCG
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4464	162	4	ACGGAAACGATTGCCG
Edwardsiella tarda EIB202	ETAE_3545	-132	3.8	ATATAAGCGTTTGCGT
Proteus mirabilis HI4320	PMI2915	-92	5.5	ACGCAATCGATTACTT

Position: -50 Score: 4.4 Sequence: ATGAAATCGTTTGCTT Locus tag: PROVALCAL_02803
	PROVALCAL_02803	-50	4.4	ATGAAATCGTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: codB
Ortholog function: cytosine permease
Escherichia coli str. K-12 substr. MG1655	b0336	-82	4.6	ACGAAAACGATTGCTT
Salmonella typhimurium LT2	STM3333	-74	4.8	ACGAAAACGTTTGCTT
Edwardsiella tarda EIB202	ETAE_3253	-83	4.6	AAGAAAACGTTTGCTT
Proteus mirabilis HI4320	PMI1458	-80	4.4	ACGAAAACGTTTGCAT

Position: 21 Score: 4.1 Sequence: GGGAAAACGATTGCGC Locus tag: PROVALCAL_03766
	PROVALCAL_03766	21	4.1	GGGAAAACGATTGCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: folD
Ortholog function: 5,10-methylene-tetrahydrofolate dehydrogenase
Salmonella typhimurium LT2	STM0542	-89	4.3	ACACAAACGTTAACTG
Citrobacter koseri ATCC BAA-895	CKO_02629	-89	4.6	ACGCAAACGATAACTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00484	-88	3.7	CAGCAAACGAGGACTG
Yersinia pestis KIM	y1110	-155	3.8	GGGCAGTCGCTTTCGA
Proteus mirabilis HI4320	PMI2155	21	4.1	GGGAAAACGATTGCGC
Photorhabdus luminescens subsp. laumondii TTO1	plu4317	21	4.1	GGGAAAACGATTGCGC

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of PurR regulog to Providencia alcalifaciens DSM 30120

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --