Propagation of RcnR regulog to Escherichia coli UTI89
| Source regulog: | RcnR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | CsoR |
| Regulation mode: | repressor |
| Biological process: | Cobalt resistance; Nickel resistance |
| Effector: | Nickel ion, (Ni2+); Cobalt ion, (Co2+) |
| Phylum: | Gammaproteobacteria |
| Propagated regulon: | |
| Target genome | Escherichia coli UTI89 |
| Orthologous TF(s) | UTI89_C2379 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -83
Score: 5.4 Sequence: TACTCCCCCCCAGTA
Locus tag: UTI89_C2379
|
||||
| UTI89_C2379 | -83 | 5.4 | TACTCCCCCCCAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rcnR | ||||
| Ortholog function: Cobalt and nickel resistance transcriptional regulator RcnR | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_04229 | -84 | 5.4 | TACTCCCCCCCAGTA |
| -64 | 5.2 | TACTACCCCCCAGTA | ||
| Escherichia coli str. K-12 substr. MG1655 | b2105 | -83 | 5.4 | TACTCCCCCCCAGTA |
| -63 | 5.2 | TACTACCCCCCAGTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00424 | -61 | 5.4 | TACTCCCCCCCAGTA |
| -40 | 5.2 | TACTACCCCCCAGTA | ||
| Salmonella typhimurium LT2 | STM3023 | -84 | 5.4 | TACTCCCCCCCAGTA |
| -64 | 5.2 | TACTACCCCCCAGTA | ||
|
Position: -52
Score: 5.4 Sequence: TACTGGGGGGGAGTA
Locus tag: UTI89_C2380
|
||||
| UTI89_C2380 | -52 | 5.4 | TACTGGGGGGGAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rcnA | ||||
| Ortholog function: Nickel/cobalt efflux transporter RcnA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2106 | -72 | 5.2 | TACTGGGGGGTAGTA |
| -52 | 5.4 | TACTGGGGGGGAGTA | ||