Propagation of ExuR regulog to Escherichia coli UTI89
Source regulog: | ExuR - Enterobacteriales |
Regulator type: | Transcription factor |
Regulator family: | GntR/Others |
Regulation mode: | repressor |
Biological process: | Galacturonate utilization |
Effector: | Galacturonate |
Phylum: | Proteobacteria/gamma |
Propagated regulon: | |
Target genome | Escherichia coli UTI89 |
Orthologous TF(s) | UTI89_C3532 |
Regulated genes | 4 |
Locus tag | Position | Score | Sequence | |
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Position: -33
Score: 4.3 Sequence: CAGGTTGTATGACTAATCA
Locus tag: UTI89_C1740
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UTI89_C1740 | -33 | 4.3 | CAGGTTGTATGACTAATCA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: uxaB | ||||
Ortholog function: Altronate oxidoreductase (EC 1.1.1.58) | ||||
Escherichia coli str. K-12 substr. MG1655 | b1521 | -33 | 4.3 | CAGGTTGTATGACTAATCA |
Citrobacter koseri ATCC BAA-895 | CKO_01541 | -34 | 4.5 | CAGGTTGTATGACTAATTA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01640 | -34 | 4.3 | CAGGTTGTATGACTACTAT |
Yersinia pestis KIM | y3599 | -69 | 6 | TAATTGGTGTGATAACTTT |
Edwardsiella tarda EIB202 | ETAE_0437 | -69 | 6.1 | AAATTGGTGTGATAACTTC |
Position: -8
Score: 6.2 Sequence: AAATTGGTGTGATAACTTT
Locus tag: UTI89_C3530
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UTI89_C3530 | -8 | 6.2 | AAATTGGTGTGATAACTTT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: uxaC | ||||
Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
Escherichia coli str. K-12 substr. MG1655 | b3092 | -71 | 6.2 | AAATTGGTGTGATAACTTT |
Citrobacter koseri ATCC BAA-895 | CKO_04494 | -8 | 6.2 | AAATTGGTGTGATAACTTT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03520 | -90 | 6.2 | AAATTGGTGTGATAACTTT |
Enterobacter sp. 638 | Ent638_3546 | -70 | 6.2 | AAATTGGTGTGATAACTTT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0645 | -67 | 5.4 | TAATTGGTGTGATATCTTT |
Position: -129
Score: 6.2 Sequence: AAAGTTGTATGACAAGTTA
Locus tag: UTI89_C3531
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UTI89_C3531 | -129 | 6.2 | AAAGTTGTATGACAAGTTA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: exuT | ||||
Ortholog function: Hexuronate transporter | ||||
Escherichia coli str. K-12 substr. MG1655 | b3093 | -129 | 6.2 | AAAGTTGTATGACAAGTTA |
Citrobacter koseri ATCC BAA-895 | CKO_04495 | -227 | 5.7 | GAAGTTGTATGACAAGTTA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03521 | -240 | 6.2 | AAAGTTGTATGACAAGTTA |
Enterobacter sp. 638 | Ent638_3547 | -116 | 6.2 | AAAGTTGTATGACAAGTTA |
Yersinia pestis KIM | y3601 | -515 | 5.6 | AAAtctGTATGACAAgTTa |
Serratia proteamaculans 568 | Spro_4322 | -157 | 5.6 | AAATCTGTATGACAAGTTA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0644 | -185 | 6.2 | AAAGTTGTATGACAAATTA |
Edwardsiella tarda EIB202 | ETAE_0435 | -282 | 5.2 | GAATCTGTATGACAAGTTA |
Position: -47
Score: 6 Sequence: AAAGTGGTATAACAAATAT
Locus tag: UTI89_C3532
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UTI89_C3532 | -47 | 6 | AAAGTGGTATAACAAATAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: exuR | ||||
Ortholog function: D-galacturonate transcriptional repressor, GntR family | ||||
Escherichia coli str. K-12 substr. MG1655 | b3094 | -47 | 6 | AAAGTGGTATAACAAATAT |
Citrobacter koseri ATCC BAA-895 | CKO_04496 | -47 | 6 | AAAGTGGTATAACAAATAT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03522 | -48 | 5.8 | AAAGTGGTATAACAAATCG |
Enterobacter sp. 638 | Ent638_3548 | -45 | 6.1 | AAAGTGGTATAACAAATCA |
Yersinia pestis KIM | y3602 | -105 | 5.8 | TAAGTGGTATAACAAATCC |
Serratia proteamaculans 568 | Spro_4323 | -57 | 5.8 | TAAGTGGTATAACAAATCC |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0643 | -98 | 5.9 | TAAGTGGTATAACAAATCA |
Edwardsiella tarda EIB202 | ETAE_0434 | -68 | 5.8 | AAAGTGGTATAACAACTCG |