Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AgaR regulog to Escherichia coli UTI89

Reference regulog properties
Source regulog: AgaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli UTI89
Orthologous TF(s) UTI89_C3560
Regulated genes 3
Built upon 19 sites [see more]
Predicted regulatory interactions in Escherichia coli UTI89
Locus tag Position Score Sequence
Position: -214
Score: 5.9
Sequence: CTTTCGTTTTGTTTC
Locus tag: UTI89_C3560
UTI89_C3560 -214 5.9 CTTTCGTTTTGTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: agaR
Ortholog function: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Escherichia coli str. K-12 substr. MG1655 b3131 -34 -1.1 GAAATGAAACGAAAG
Citrobacter koseri ATCC BAA-895 CKO_04529 -35 -1.1 GAAATGAAACGAAAG
Enterobacter sp. 638 Ent638_3571 -35 -1.1 GAAATGAAACGAAAG
Position: -229
Score: 5.9
Sequence: CTTTCGTTTCATTTC
Position: -90
Score: 5.9
Sequence: CTTTCGTTTTATTTT
Locus tag: UTI89_C3561
UTI89_C3561 -229 5.9 CTTTCGTTTCATTTC
-90 5.9 CTTTCGTTTTATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: agaZ
Ortholog function: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Escherichia coli str. K-12 substr. MG1655 b3132 -229 5.9 CTTTCGTTTCATTTC
-134 5.4 CTTTCATTATGTTTC
-90 5.9 CTTTCGTTTTATTTT
Citrobacter koseri ATCC BAA-895 CKO_04530 -247 5.9 CTTTCGTTTCATTTC
-152 5.4 CTTTCATTATGTTTC
-108 5.9 CTTTCGTTTTATTTT
Enterobacter sp. 638 Ent638_3572 -230 5.9 CTTTCGTTTCATTTC
-134 5.6 CTTTCGTTATGTTTC
-90 5.9 CTTTCGTTTTATTTT
Position: -149
Score: 5.6
Sequence: ATTTCGTTTTATTTC
Locus tag: UTI89_C3567
UTI89_C3567 -149 5.6 ATTTCGTTTTATTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: agaS
Ortholog function: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Escherichia coli str. K-12 substr. MG1655 b3136 -150 5.6 ATTTCGTTTTATTTC
-119 5.1 CTTTCAGTTTCTTTT
Citrobacter koseri ATCC BAA-895 CKO_04536 -252 5.3 CTTTCTTTTTCTTTC
-150 5.7 TTTTCGTTTTATTTC
-119 5.4 CTTTCGATTTCTTTT
Enterobacter sp. 638 Ent638_3577 -144 5.7 TTTTCGTTTTATTTC
-113 4.6 CTTTCACTTTCCTTT