Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SdaR regulog to Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150

Reference regulog properties
Source regulog: SdaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: SdaR
Regulation mode: activator
Biological process: Glucarate utilization; Galactarate utilization
Effector: Glycerate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
Orthologous TF(s) SPA0375, SPA0216
Regulated genes 2
Built upon 31 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
Locus tag Position Score Sequence
Position: -71
Score: 5.8
Sequence: TTTTGTGCATTTGCACAATG
Locus tag: SPA0216
SPA0216 -71 5.8 TTTTGTGCATTTGCACAATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdaR
Ortholog function: Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family
Escherichia coli str. K-12 substr. MG1655 b0162 -69 5.3 CTTTAGGCATTTGCACAATG
Salmonella typhimurium LT2 STM0210 -71 5.8 TTTTGTGCATTTGCACAATG
Citrobacter koseri ATCC BAA-895 CKO_03205 -17 5.1 GTTTGTGCAGATGCACAATG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00177 -17 5.4 CTTAGTGCAAATGCACAATG
Enterobacter sp. 638 Ent638_0702 -71 5.3 CTTTGTGCATTCGCACAATG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3300 -80 4.3 CTTTGTTAATTTGCACAATG
Position: -317
Score: 5.1
Sequence: TCATGGGCGTATGCTCAAAA
Position: -274
Score: 4.8
Sequence: TAATGAGCGTTTGCACAATG
Locus tag: SPA3118
SPA3118 -317 5.1 TCATGGGCGTATGCTCAAAA
-274 4.8 TAATGAGCGTTTGCACAATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: garL
Ortholog function: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
Escherichia coli str. K-12 substr. MG1655 b3126 -186 6 TTATGTGCATATGCTCAAAA
-144 4.5 AAATTAGCATTTGCACAATG
Salmonella typhimurium LT2 STM3249 -316 5.1 TCATGGGCGTATGCTCAAAA
-273 4.8 TAATGAGCGTTTGCACAATG
Citrobacter koseri ATCC BAA-895 CKO_04523 -203 5.6 CGTTGTGCAAATGCTCAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03538 -206 4.7 CTTATGGCATAAGCACAATT
Enterobacter sp. 638 Ent638_3568 -208 5.4 GGTTGTGCATATGCTCAAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3574 -358 4.1 TGCTGGGCTATTGCCCAATG