Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NarP regulog to Cronobacter turicensis z3032

Reference regulog properties
Source regulog: NarP - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrate; Nitrite
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Cronobacter turicensis z3032
Orthologous TF(s) Ctu_30620
Regulated genes 12
Built upon 125 sites [see more]
Predicted regulatory interactions in Cronobacter turicensis z3032
Locus tag Position Score Sequence
Position: -26
Score: 4.6
Sequence: TACCTCGAAGGGAGCA
Locus tag: Ctu_00030
Ctu_00030 -26 4.6 TACCTCGAAGGGAGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI
Ortholog function: ATP synthase maturation
Escherichia coli str. K-12 substr. MG1655 b3739 -31 4.6 TACCTCGAAGGGAGCA
Salmonella typhimurium LT2 STM3872 -30 4.5 TACCTCGAAGTGAGCA
Citrobacter koseri ATCC BAA-895 CKO_00079 -30 4.6 TACCTCGAAGGGAGCA
Serratia proteamaculans 568 Spro_0001 -33 4.6 TACCTCCTCAGGGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4519 -33 4.3 TACCTCTGAAAAGGTA
Edwardsiella tarda EIB202 ETAE_3526 -156 4.4 TACCTCCTGGGGGGTA
Position: -124
Score: 4.3
Sequence: TACCGCTTTTGAGGTA
Locus tag: Ctu_07480
Ctu_07480 -124 4.3 TACCGCTTTTGAGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pdhR
Ortholog function: Pyruvate utilization transcriptional regulator PdhR, GntR family
Salmonella typhimurium LT2 STM0151 -204 4.3 TACCTCCTGGTGGGTA
Citrobacter koseri ATCC BAA-895 CKO_03260 -204 4.2 TACTCCCAGGGGAGTA
Serratia proteamaculans 568 Spro_4012 -198 4.2 TACCTCGTAAATGGTA
Position: -140
Score: 4.7
Sequence: TACTCCTTTGGCGGTA
Locus tag: Ctu_14840
Ctu_14840 -140 4.7 TACTCCTTTGGCGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Citrobacter koseri ATCC BAA-895 CKO_02206 -109 4.3 TACCTCCCTGGCGGTA
Position: -69
Score: 4.3
Sequence: TACTCCATTCTGGGTA
Locus tag: Ctu_22090
Ctu_22090 -69 4.3 TACTCCATTCTGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ynfE
Ortholog function: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-)
Escherichia coli str. K-12 substr. MG1655 b1587 -92 4.7 TAACCCAAAATGGGTA
Salmonella typhimurium LT2 STM1499 -95 5 TACTCCCAAAGGGGTA
Citrobacter koseri ATCC BAA-895 CKO_01581 -93 4.8 TACCTATAAGGGGTTA
-20 3.8 TAACTATAATGGAGTG
Serratia proteamaculans 568 Spro_1687 -143 4.3 TACCCACTTCTGAGTA
Position: -55
Score: 4.5
Sequence: TAACTCGTAGTGAGTA
Locus tag: Ctu_23630
Ctu_23630 -55 4.5 TAACTCGTAGTGAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: Outer membrane protein W precursor
Escherichia coli str. K-12 substr. MG1655 b1256 -55 4.5 TACTCCAATGTAGGTA
Salmonella typhimurium LT2 STM1732 -55 4.7 TACTTCATTGTGGGTA
Citrobacter koseri ATCC BAA-895 CKO_01333 -55 4.5 TACTCCATTGTAGGTA
Yersinia pestis KIM y2044 -43 4.7 TACTCATTTGTAGGTA
Serratia proteamaculans 568 Spro_2674 -28 4.5 TACCCGTAAGTAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2303 -56 4.9 TACCTACTTAGGGGTA
Edwardsiella tarda EIB202 ETAE_1528 -52 3.7 TCACTCAATATGGTTA
Proteus mirabilis HI4320 PMI1350 -59 4.9 TACTTATTAATGGGTA
Photorhabdus luminescens subsp. laumondii TTO1 plu2478 -55 3.8 TTCTAATATATGAGTA
Position: -211
Score: 4.4
Sequence: TAACCAGAAGTGAGTA
Locus tag: Ctu_23840
Ctu_23840 -211 4.4 TAACCAGAAGTGAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Escherichia coli str. K-12 substr. MG1655 b1241 -215 4.7 TACCCAGAAGTGAGTA
Salmonella typhimurium LT2 STM1749 -216 4.6 TACTCAGAAGTGAGTA
Citrobacter koseri ATCC BAA-895 CKO_01318 -216 4.6 TACTCAGAAGTGAGTA
Yersinia pestis KIM y2023 -260 4 TACCTAAGAATAGTTA
Serratia proteamaculans 568 Spro_2704 -252 4 TACCCAAGAGTAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -289 4 CACCCACAAATAGGTA
Edwardsiella tarda EIB202 ETAE_1508 -239 4.4 TACCCAAGAATGAGTA
Position: -77
Score: 3.7
Sequence: CTCCTCTAAAGGGTTA
Locus tag: Ctu_36630
Ctu_36630 -77 3.7 CTCCTCTAAAGGGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnrN
Ortholog function: Nitric oxide-dependent regulator DnrN
Escherichia coli str. K-12 substr. MG1655 b4209 -79 3.7 TGCTACGTAAGGGTTA
Salmonella typhimurium LT2 STM4399 -78 3.9 CACCCCGAAAGAGTTA
Citrobacter koseri ATCC BAA-895 CKO_03623 -78 3.9 TGACCCGAAAGGGTTA
Yersinia pestis KIM y0652 -108 4.4 TACCCACTTGGAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3606 -81 4.8 TACCTCGTAAGCGGTA
Position: -101
Score: 5.2
Sequence: TACCCATTAAGGGGTA
Locus tag: Ctu_38830
Ctu_38830 -101 5.2 TACCCATTAAGGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirB
Ortholog function: Nitrite reductase large subunit (EC 1.7.1.4)
Escherichia coli str. K-12 substr. MG1655 b3365 -101 5.1 TACCCATTAAGGAGTA
Salmonella typhimurium LT2 STM3474 -101 5 TACCCATTAAGAGGTA
Citrobacter koseri ATCC BAA-895 CKO_04789 -101 5.2 TACCTCTTAAGGAGTA
Yersinia pestis KIM y3945 -100 4.5 TACCACCTTAGAGGTA
Serratia proteamaculans 568 Spro_4595 -197 4.5 TACTCCCGAATGGGTA
-101 4.5 TACCACATTAGAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4079 -100 4.8 TACCCACAAAGAAGTA
Proteus mirabilis HI4320 PMI1479 -134 4.1 TACTACTTTGGTAGTA
© 2009-2020 RegPrecise