Propagation of Fur regulog to Escherichia coli E110019

Reference regulog properties
Source regulog:	Fur - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Escherichia coli E110019
Orthologous TF(s)	EcolE1_01004678
Regulated genes	41

Built upon 656 sites [see more]

Predicted regulatory interactions in *Escherichia coli E110019*
	Locus tag	Position	Score	Sequence
Position: -97 Score: 4.7 Sequence: GCTAATGATAACCATTCCC Locus tag: EcolE1_01000132
	EcolE1_01000132	-97	4.7	GCTAATGATAACCATTCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yddA
Ortholog function: fused predicted multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component
Escherichia coli str. K-12 substr. MG1655	b1496	-4	4.4	GCTAATGATAACCATTCCC

Position: -103 Score: 4.9 Sequence: AATAATGATTACCATTCCC Locus tag: EcolE1_01000174
	EcolE1_01000174	-103	4.9	AATAATGATTACCATTCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yncE
Ortholog function: putative receptor, ATP binding
Escherichia coli str. K-12 substr. MG1655	b1452	-103	4.6	AATAATGATTACCATTCCC
Salmonella typhimurium LT2	STM1586	-103	5.2	AATAATGATTATTATTCTC
Citrobacter koseri ATCC BAA-895	CKO_01494	-202	4.5	AATAATGATTACTATTCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01908	-103	4.5	AATAATGATTACTATTCGC
Enterobacter sp. 638	Ent638_2098	-100	4.8	AATAATGATTACTATTCTC
Serratia proteamaculans 568	Spro_0586	-143	4.8	AATAATGATTACTATTCTC

Position: -241 Score: 4.8 Sequence: GGGAATGGTAATCATTATT Locus tag: EcolE1_01000175
	EcolE1_01000175	-241	4.8	GGGAATGGTAATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yncD
Ortholog function: TonB-dependent siderophore outer membrane receptor
Escherichia coli str. K-12 substr. MG1655	b1451	-157	4.7	GGGAATGGTAATCATTATT
Citrobacter koseri ATCC BAA-895	CKO_01493	-181	4.5	GCGAATAGTAATCATTATT

Position: -71 Score: 4.3 Sequence: ATGATTAACAATCATTATC Position: -65 Score: 4.9 Sequence: AACAATCATTATCATTTAC Locus tag: EcolE1_01000431
	EcolE1_01000431	-71	4.3	ATGATTAACAATCATTATC
		-65	4.9	AACAATCATTATCATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqjH
Ortholog function: FAD-binding 9, siderophore-interacting domain protein
Escherichia coli str. K-12 substr. MG1655	b3070	-71	4.2	ATGATTAACAATCATTATC
		-65	4.6	AACAATCATTATCATTTGC
Salmonella typhimurium LT2	STM3214	-62	4.3	AACAATCATTATCATTTAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03499	-62	4.5	GGCAATCATTATCATTTGC
Enterobacter sp. 638	Ent638_3524	-61	4.1	AGCAATCATTATCATTTAA

Position: -97 Score: 4.2 Sequence: AGTAATGAGAACGACTATC Locus tag: EcolE1_01000485
	EcolE1_01000485	-97	4.2	AGTAATGAGAACGACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: TonB-dependent siderophore transporter component ExbB
Escherichia coli str. K-12 substr. MG1655	b3006	-82	4.1	AGTAATGAGAACGACTATC
Salmonella typhimurium LT2	STM3159	-82	4.1	AGTAATGAGAACGACTATC
Citrobacter koseri ATCC BAA-895	CKO_04401	-97	4.1	AGTAATGAGAACGACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03426	-97	4.3	ACTAATGAGAACCACTATC
Enterobacter sp. 638	Ent638_3417	-97	4.3	ACTAATGAGAACCACTATC
Yersinia pestis KIM	y3495	-71	4.8	ACTAATGATAATTACTATC
Serratia proteamaculans 568	Spro_4211	-94	4.4	AATAATGAGAACTACTATC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0358	-206	4.3	AATAATGAGAACGACTATC
Proteus mirabilis HI4320	PMI0029	-170	4.8	AGTAATGATAATTACTATC
Photorhabdus luminescens subsp. laumondii TTO1	plu3941	-98	5.1	AATAATGATAATTACTATC

Position: -57 Score: 4.7 Sequence: CTTTATAATAATCATTCTC Position: -51 Score: 4.7 Sequence: AATAATCATTCTCGTTTAC Locus tag: EcolE1_01000618
	EcolE1_01000618	-57	4.7	CTTTATAATAATCATTCTC
		-51	4.7	AATAATCATTCTCGTTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuA
Ortholog function: TonB-dependent siderophore receptor
Escherichia coli str. K-12 substr. MG1655	b0150	-57	4.4	CTTTATAATAATCATTCTC
		-51	4.5	AATAATCATTCTCGTTTAC
Salmonella typhimurium LT2	STM0191	-56	4.8	GGTTATAATAATAATTATC
		-50	4.8	AATAATAATTATCGTTTAC
Citrobacter koseri ATCC BAA-895	CKO_03218	-57	4	GGTCATAAGAATAATTCTC
		-51	4.3	AAGAATAATTCTCGTTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00165	-56	4	CGTCATAATAATAATTCTC
		-50	4.5	AATAATAATTCTCGTTTAC
Enterobacter sp. 638	Ent638_0690	-58	4.3	GGTCATAATAATAATTCTC
		-52	4.5	AATAATAATTCTCGTTTAC

Position: -99 Score: 4.9 Sequence: GGCATTGATAATCATTTTC Position: -93 Score: 5.2 Sequence: GATAATCATTTTCAATATC Locus tag: EcolE1_01001120
	EcolE1_01001120	-99	4.9	GGCATTGATAATCATTTTC
		-93	5.2	GATAATCATTTTCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655	b3908	-99	4.7	GGCATTGATAATCATTTTC
		-93	5	GATAATCATTTTCAATATC
Salmonella typhimurium LT2	STM4055	-99	4.7	GGCATTGATAATCATTTTC
		-93	5	GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895	CKO_03093	-88	4.3	GGCATTGATAAGCATTTTC
		-82	4.4	GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04217	-88	4.3	GGCATTGATAAGCATTTTC
		-82	4	GATAAGCATTTTCAATACC
Enterobacter sp. 638	Ent638_4063	-100	4.7	GGCATTGATAATCATTTTC
		-94	5	GATAATCATTTTCAATATC
Yersinia pestis KIM	y4080	-104	4.4	AGGTTTGATAATCATTTTC
		-98	5	GATAATCATTTTCAATATC
Serratia proteamaculans 568	Spro_0081	-105	4.7	GGCATTGATAATCATTTTC
		-99	5	GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0092	-105	4.9	AATAATCATTTTCAATATC
Proteus mirabilis HI4320	PMI3036	-95	4.6	GGATATGATAATGATTTTC
		-89	5.2	GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1	plu0075	-102	4.3	GGTATTGATAAGCATTTCC

Position: -132 Score: 4.6 Sequence: AGAAACCATTCTCATTATC Locus tag: EcolE1_01001840
	EcolE1_01001840	-132	4.6	AGAAACCATTCTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: ferrous iron transport protein A
Escherichia coli str. K-12 substr. MG1655	b3408	-138	3.4	GcTgATagaAAcCATTcTC
		-132	4.5	AGAAACCATTCTCATTATC
Salmonella typhimurium LT2	STM3505	-140	3.5	GAagATagaAAcCATTcTC
		-133	4.5	AGAAACCATTCTCATTATC
Citrobacter koseri ATCC BAA-895	CKO_04830	-139	4.1	GATGATAAAAACCATTCTC
		-133	4.7	AAAAACCATTCTCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03778	-133	4.1	GATGATAAAAACCATTCTC
		-127	4.7	AAAAACCATTCTCATTATC
Enterobacter sp. 638	Ent638_3821	-62	4.5	AGAAACCATTCTCATTATC
Yersinia pestis KIM	y3912	-118	4.1	GAGCATGAAAATAATTCTC
		-112	4.4	GAAAATAATTCTCAGTATT
Serratia proteamaculans 568	Spro_4628	-155	4.3	GAATACGATAATGATTCTC
		-149	4.9	GATAATGATTCTCACTATT
Edwardsiella tarda EIB202	ETAE_3283	-163	4.3	GAAAACGATTATCAGTTTT
		-157	4.1	GATTATCAGTTTTATTATA
Proteus mirabilis HI4320	PMI2920	-138	4	AAAGATGGTTATAATTCTC
		-132	4.3	GGTTATAATTCTCATTTGC
		-59	4.8	GTTAATAATTATCAGTATC
		-53	4.6	AATTATCAGTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1	plu0209	-244	4	AATGTTGGTTATTATTCTC
		-238	4.2	GGTTATTATTCTCATTTGC

Position: -236 Score: 5.2 Sequence: GACAATAATAATCATTCTC Position: -230 Score: 4.9 Sequence: AATAATCATTCTCATTCGC Locus tag: EcolE1_01001874
	EcolE1_01001874	-236	5.2	GACAATAATAATCATTCTC
		-230	4.9	AATAATCATTCTCATTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhY
Ortholog function: GCN5-related N-acetyltransferase
Escherichia coli str. K-12 substr. MG1655	b3441	-119	4.9	GACAATAATAATCATTCTC
		-113	4.7	AATAATCATTCTCATTCGC
Erwinia amylovora ATCC 49946	EAM_3278	-118	4.9	GGCAATAATAATCATTATC
		-112	4.9	AATAATCATTATCATTCGC
Serratia proteamaculans 568	Spro_4654	-128	4.6	CGCAATAATAATCATTATC
		-122	4.7	AATAATCATTATCATTCGT

Position: -41 Score: 4.7 Sequence: GATAATAAGAATCATTGTT Locus tag: EcolE1_01002018
	EcolE1_01002018	-41	4.7	GATAATAAGAATCATTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemP
Ortholog function: hemin uptake protein
Escherichia coli str. K-12 substr. MG1655	b1705	-47	4.1	AATATTGATAATAAGAATC
		-41	4.6	GATAATAAGAATCATTGTT
Salmonella typhimurium LT2	STM1346	-47	4.5	ATTATTGATAATAATAATC
		-41	4.7	GATAATAATAATCATTGTG
Citrobacter koseri ATCC BAA-895	CKO_01729	-50	4.7	AATATTGATAATAATAATC
		-44	4.9	GATAATAATAATCATTGTT
Citrobacter koseri ATCC BAA-895	CKO_03737	14	4.1	CTTGATGATAATCATTCTT
		20	4.8	GATAATCATTCTTGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02163	-10	4.8	ATTATTGATAATGATTATC
		-4	5.1	GATAATGATTATCATTGTT
Enterobacter sp. 638	Ent638_1742	-50	4.2	TTTGTTGATAATGATTATC
		-44	5.1	GATAATGATTATCATTGTT
Serratia proteamaculans 568	Spro_2170	-68	4	TCACATGATAATGATTCTC
		-62	4.6	GATAATGATTCTCACTTTG
Edwardsiella tarda EIB202	ETAE_1796	-10	4.1	TTATACGATAATGATTATC
		-4	5.1	GATAATGATTATCATTAAG
Proteus mirabilis HI4320	PMI1424	-52	5.1	GATAACGATAATGATTATC
		-46	5.4	GATAATGATTATCATAATC
		-40	4.4	GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1	plu2631	-54	4.7	TATAACGATAATAATTCTC
		-48	4.6	GATAATAATTCTCACTATG

Position: -65 Score: 4.8 Sequence: TGTACTGATAATCATTATC Position: -59 Score: 5.2 Sequence: GATAATCATTATCACTAAC Locus tag: EcolE1_01002039
	EcolE1_01002039	-65	4.8	TGTACTGATAATCATTATC
		-59	5.2	GATAATCATTATCACTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: scaffold protein for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655	b1684	-65	4.4	TGAACTGATAATCATTATC
		-59	5.1	GATAATCATTATCACTAAC
Salmonella typhimurium LT2	STM1369	-66	4.7	TGAAGTGATAATCATTATC
		-60	5.1	GATAATCATTATCACTAAC
Citrobacter koseri ATCC BAA-895	CKO_01717	-66	4.7	TGAAGTGATAATCATTATC
		-60	5.1	GATAATCATTATCACTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02141	-66	4.7	TGAAGTGATAATCATTATC
		-60	5.1	GATAATCATTATCACTAAC
Enterobacter sp. 638	Ent638_1760	-67	4.4	TGAAGTGATAATCGTTATC
		-61	4.7	GATAATCGTTATCACTAAC
Yersinia pestis KIM	y1934	-129	4.5	TGAAGTGATAATTATTATC
		-123	4.8	GATAATTATTATCACTACC
Serratia proteamaculans 568	Spro_2179	-77	4.4	TGAAGTGATAATCGTTATC
		-71	4.7	GATAATCGTTATCACTAAC
Proteus mirabilis HI4320	PMI1416	-66	4.4	GATAAGGGTTATCATTACC
		-60	4	GGTTATCATTACCATTAGA
Photorhabdus luminescens subsp. laumondii TTO1	plu2622	-87	4.4	GATAAAGGTTATCATTACC
		-81	4.3	GGTTATCATTACCATTATA

Position: -184 Score: 4.4 Sequence: ATTATTGATAACTATTTGC Position: -178 Score: 4.2 Sequence: GATAACTATTTGCATTTGC Locus tag: EcolE1_01002074
	EcolE1_01002074	-184	4.4	ATTATTGATAACTATTTGC
		-178	4.2	GATAACTATTTGCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepA
Ortholog function: TonB-dependent siderophore receptor FepA
Escherichia coli str. K-12 substr. MG1655	b0584	-184	4.1	ATTATTGATAACTATTTGC
		-178	4	GATAACTATTTGCATTTGC
Salmonella typhimurium LT2	STM0585	-132	4.1	ATTATTGATAACTATTTGC
		-126	4	GATAACTATTTGCATTTGC
Citrobacter koseri ATCC BAA-895	CKO_02579	-246	4.4	GATAACTATTTTCATTTGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00602	-197	4.1	ATTATTGATAACTATTTGC
		-191	4	GATAACTATTTGCATTTGC
Enterobacter sp. 638	Ent638_1116	-196	4.4	ATTATTGATAACTATTTTC
		-190	4.4	GATAACTATTTTCATTTGC

Position: -25 Score: 4.9 Sequence: GATAACGATAATTAATTTC Position: -19 Score: 5 Sequence: GATAATTAATTTCATTATC Locus tag: EcolE1_01002081
	EcolE1_01002081	-25	4.9	GATAACGATAATTAATTTC
		-19	5	GATAATTAATTTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepD
Ortholog function: iron-enterobactin (enterochelin) ABC transporter membrane protein
Escherichia coli str. K-12 substr. MG1655	b0590	-37	4.8	GATAACGATAATTAATTTC
		-31	4.9	GATAATTAATTTCATTATC
Salmonella typhimurium LT2	STM0592	-37	4.8	GATAACGATAATTACTATC
		-31	5	GATAATTACTATCATTATC
Citrobacter koseri ATCC BAA-895	CKO_02571	-37	4.8	GATAACGATAATTACTATC
		-31	5	GATAATTACTATCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00608	-43	4.8	GATAACGATAATTACTATC
		-37	5	GATAATTACTATCATTATC
Enterobacter sp. 638	Ent638_1122	-30	4.8	GATAACGATAATTACTATC
		-24	5	GATAATTACTATCATTATC
Serratia proteamaculans 568	Spro_3424	-48	4.4	AATAATGATAATAAAACTC
		-42	4.4	GATAATAAAACTCATTTAT

Position: -98 Score: 5 Sequence: GATAATGAAATTAATTATC Position: -92 Score: 5 Sequence: GAAATTAATTATCGTTATC Locus tag: EcolE1_01002082
	EcolE1_01002082	-98	5	GATAATGAAATTAATTATC
		-92	5	GAAATTAATTATCGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybdA
Ortholog function: enterobactin exporter EntS, MFS family
Escherichia coli str. K-12 substr. MG1655	b0591	-98	4.8	GATAATGAAATTAATTATC
		-92	4.9	GAAATTAATTATCGTTATC
Salmonella typhimurium LT2	STM0593	-98	4.9	GATAATGATAGTAATTATC
		-92	4.8	GATAGTAATTATCGTTATC
Citrobacter koseri ATCC BAA-895	CKO_02570	-99	4.9	GATAATGATAGTAATTATC
		-93	4.8	GATAGTAATTATCGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00609	-94	4.9	GATAATGATAGTAATTATC
		-88	4.8	GATAGTAATTATCGTTATC
Enterobacter sp. 638	Ent638_1123	-94	4.9	GATAATGATAGTAATTATC
		-88	4.8	GATAGTAATTATCGTTATC
Serratia proteamaculans 568	Spro_3423	-112	4.4	ATAAATGAGTTTTATTATC
		-106	4.4	GAGTTTTATTATCATTATT

Position: -278 Score: 4.8 Sequence: GAAAATGAGAAGCATTATT Locus tag: EcolE1_01002083
	EcolE1_01002083	-278	4.8	GAAAATGAGAAGCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepB
Ortholog function: ferric enterobactin (enterochelin) binding protein; periplasmic component
Escherichia coli str. K-12 substr. MG1655	b0592	-230	4.7	GAAAATGAGAAGCATTATT
Citrobacter koseri ATCC BAA-895	CKO_02569	-203	4.7	GAAAATGAGAAGCATTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00610	-166	4.8	GATATTAAGAATAATTATC
		-160	4.6	AAGAATAATTATCATTTAT
Enterobacter sp. 638	Ent638_1124	-159	4.6	AAGAATAATTATCATTTAT
		-44	4.7	GAAAATGAGAAGCATTAAC

Position: -151 Score: 4.9 Sequence: AATAATGCTTCTCATTTTC Position: -36 Score: 5.2 Sequence: ATAAATGATAATCATTATT Locus tag: EcolE1_01002084
	EcolE1_01002084	-151	4.9	AATAATGCTTCTCATTTTC
		-36	5.2	ATAAATGATAATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: entC
Ortholog function: isochorismate synthetase, siderophore biosynthesis
Escherichia coli str. K-12 substr. MG1655	b0593	-163	4.6	AATAATGCTTCTCATTTTC
		-48	5	ATAAATGATAATCATTATT
Salmonella typhimurium LT2	STM0595	-170	4.9	AGAAATAATAATCATTATT
		-164	4.4	AATAATCATTATTATACAC

Position: -128 Score: 4.4 Sequence: GATAATGCTTATCAAAATT Position: -122 Score: 4.6 Sequence: GCTTATCAAAATTATTATC Position: -116 Score: 4.4 Sequence: CAAAATTATTATCACTTGC Locus tag: EcolE1_01002396
	EcolE1_01002396	-128	4.4	GATAATGCTTATCAAAATT
		-122	4.6	GCTTATCAAAATTATTATC
		-116	4.4	CAAAATTATTATCACTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fiu
Ortholog function: iron outer membrane transporter
Escherichia coli str. K-12 substr. MG1655	b0805	-123	4.4	GCTTATCAAAATTATTATC
		-117	4.5	CAAAATTATTATCACTTTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01250	-126	4.2	GCAAATGATAACTATTCTT
		-120	4.1	GATAACTATTCTTTTTATC

Position: -61 Score: 5.4 Sequence: GATAATGAGAATCATTATT Position: -40 Score: 4.2 Sequence: CATAATTGTTATTATTTTA Locus tag: EcolE1_01002501
	EcolE1_01002501	-61	5.4	GATAATGAGAATCATTATT
		-40	4.2	CATAATTGTTATTATTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: iucA2
Ortholog function: aerobactin synthetase (subunit alpha)
Yersinia pestis KIM	y3380	-63	4.8	GATAATGATAACCACTATT
Yersinia pestis KIM	y3381	-63	4.8	GATAATGATAACCACTATT
Serratia proteamaculans 568	Spro_0922	-63	4.2	GATAACAATAAATATTATT
		-45	4.1	TGATATAAGAATCATTCTC

Position: -114 Score: 4.3 Sequence: TAAAATAATAACAATTATG Position: -93 Score: 5.6 Sequence: AATAATGATTCTCATTATC Locus tag: EcolE1_01002502
	EcolE1_01002502	-114	4.3	TAAAATAATAACAATTATG
		-93	5.6	AATAATGATTCTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_00976
Ortholog function: hypothetical protein
Citrobacter koseri ATCC BAA-895	CKO_00976	-90	4.3	GATAAGGTTTCTCATTATC

Position: -47 Score: 5.2 Sequence: TATAATGAGAATTATTATC Position: -41 Score: 4.9 Sequence: GAGAATTATTATCATTAAA Locus tag: EcolE1_01002520
	EcolE1_01002520	-47	5.2	TATAATGAGAATTATTATC
		-41	4.9	GAGAATTATTATCATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gpmA
Ortholog function: phosphoglyceromutase 1
Escherichia coli str. K-12 substr. MG1655	b0755	-47	5	TATAATGAGAATTATTATC
		-41	4.7	GAGAATTATTATCATTAAA
Salmonella typhimurium LT2	STM0772	-47	5	TATAATGAGAATTATTATC
		-41	4.5	GAGAATTATTATCATTACA
Citrobacter koseri ATCC BAA-895	CKO_02381	-46	5	TATAATGAGAATTATTATC
		-40	4.5	GAGAATTATTATCATTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00768	-96	4.6	TATAATGAGAATAGTTATC
Enterobacter sp. 638	Ent638_1246	-164	4.7	TATAATGAGAATTGTTATC
		-158	4.1	GAGAATTGTTATCATTCAA
Yersinia pestis KIM	y3048	-103	5.3	TATAATGATAATAATTATC
		-97	4.6	GATAATAATTATCATTGAA
Serratia proteamaculans 568	Spro_1288	-51	4.9	TATAATGATTTTCGTTATC
Edwardsiella tarda EIB202	ETAE_2569	-49	4.6	CATGATGATAATAATTATC
		-43	5.3	GATAATAATTATCATTATA

Position: -68 Score: 5 Sequence: GAATTTGATAATCATTCTC Position: -62 Score: 4.2 Sequence: GATAATCATTCTCGTTTGG Locus tag: EcolE1_01002758
	EcolE1_01002758	-68	5	GAATTTGATAATCATTCTC
		-62	4.2	GATAATCATTCTCGTTTGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655	b2392	-68	4.7	GAATTTGATAATCATTCTC
		-62	4.2	GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2	STM2408	-68	4.5	GCACTTGATAATCATTATC
		-62	4.8	GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895	CKO_00404	-50	4.3	GCACTTGATAATCATTCTC
		-44	4.5	GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02743	-68	4.3	GAACTTGATAATCATTCGC
		-62	4.3	GATAATCATTCGCATTTTG
Enterobacter sp. 638	Ent638_2926	-67	4.8	GATCTTGATAATCATTCTC
		-61	4.8	GATAATCATTCTCATTTTG
Yersinia pestis KIM	y1500	-78	4	GCGCTTGATAATTATTCTC
		-72	4.6	GATAATTATTCTCATTTAA
Serratia proteamaculans 568	Spro_3415	-66	4.3	GCACTTGATAATTATTATC
		-60	5.2	GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0843	-63	4.5	GCACTTGATAATCATTATC
		-57	5.2	GATAATCATTATCATTTTT
Edwardsiella tarda EIB202	ETAE_1142	-134	4.5	GCAGTTGATAATCATTATC

Position: -63 Score: 4.9 Sequence: TGTAATGATAACCATTCTC Locus tag: EcolE1_01002781
	EcolE1_01002781	-63	4.9	TGTAATGATAACCATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecI
Ortholog function: ECF-family RNA polymerase sigma factor fecI
Escherichia coli str. K-12 substr. MG1655	b4293	-63	4.7	TGTAATGATAACCATTCTC
		-57	4.1	GATAACCATTCTCATATTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1079	-76	4.6	TGTAATGAGAACCATTATC
		-70	4.1	GAGAACCATTATCATATTA
Photorhabdus luminescens subsp. laumondii TTO1	plu4444	-64	4.5	TGTAATGATAACTATTCTC

Position: -126 Score: 3.7 Sequence: GGTAATGCGTTTTATTCCC Locus tag: EcolE1_01002846
	EcolE1_01002846	-126	3.7	GGTAATGCGTTTTATTCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655	b1905	-127	3.4	GgTAATGcgttTtATTccC
		-121	3	GcgttTtATtccCATTcgt
Salmonella typhimurium LT2	STM1935	-100	4	AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895	CKO_01042	-97	4.3	AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02402	-161	4	ATAAATTAAAAGCATTCTC
		-155	3.8	TAAAAGCATTCTCATTTAT
Enterobacter sp. 638	Ent638_2486	-103	3.7	TATTTTAATAAATAATATC
		-97	3.6	AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946	EAM_2940	-131	4.4	TGGAATGATTATCAATTAC
Yersinia pestis KIM	y2524	-93	4.4	AATAATGTGAATGATTATC
		-87	4.1	GTGAATGATTATCATGATG
Serratia proteamaculans 568	Spro_1942	-174	4.5	GAAAATAGTTATCATAATT
		-168	4	AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2473	-158	4.6	TTAAATGATAATGAATATC
		-152	4.8	GATAATGAATATCAATAGC
Proteus mirabilis HI4320	PMI1007	-184	4.7	GTTAATGATAATCAATTCC
		-178	4.1	GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1	plu2689	-147	4.4	TTAAATGAGATTCATTTTC
		-141	4.4	GAGATTCATTTTCATTTTT

Position: -245 Score: 4.9 Sequence: GGTAATGAGAATAATTAAC Locus tag: EcolE1_01002959
	EcolE1_01002959	-245	4.9	GGTAATGAGAATAATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppA
Ortholog function: oligopeptide ABC transporter; periplasmic binding protein
Escherichia coli str. K-12 substr. MG1655	b1243	-245	4.7	GGTAATGAGAATAATTAAC
Citrobacter koseri ATCC BAA-895	CKO_01320	-247	4.3	GGTGATGAGAATTATTTTC
		-241	4	GAGAATTATTTTCAATAAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02197	-216	4.4	GCAAATGAGAATTATTTTT
Enterobacter sp. 638	Ent638_2302	-247	4	GTAGATGAGAATGATTTTC

Position: -151 Score: 4.7 Sequence: ATAAATTATTCTCATTATT Locus tag: EcolE1_01003629
	EcolE1_01003629	-151	4.7	ATAAATTATTCTCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cfrA
Ortholog function: TonB-dependent outer membrane receptor
Citrobacter koseri ATCC BAA-895	CKO_01134	-4	4.8	TGTAATGATAATTATTTTT
		2	5	GATAATTATTTTTATTATC
		8	4.5	TATTTTTATTATCATTTTC
Yersinia pestis KIM	y0850	-103	4.6	AGTAATGATAATTGATATC
		-97	4.4	GATAATTGATATCATTTGC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2722	-100	4.6	GCAAATGATTTTAATTTTC
		-94	4.3	GATTTTAATTTTCATTTAC

Position: -69 Score: 4.5 Sequence: CGTAATGATAATCGCTATC Locus tag: EcolE1_01003724
	EcolE1_01003724	-69	4.5	CGTAATGATAATCGCTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD
Ortholog function: iron permease FTR1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01045	-76	5	TGTAATGATAATCACTATC
		-70	4.2	GATAATCACTATCATAAAT
Enterobacter sp. 638	Ent638_1545	-76	4.9	CGTAATGATAATCACTATC
Erwinia amylovora ATCC 49946	EAM_2059	-80	4.6	GATAATGATAATCCCTATC
Yersinia pestis KIM	y2452	-84	4.4	CAGAATGATAATCACAATC
		-78	4.3	GATAATCACAATCGTTTTA
Serratia proteamaculans 568	Spro_2929	-109	4.8	CAGAATGATAATCACTATC

Position: -74 Score: 4.8 Sequence: AGAAATAGTTATCATTTTC Locus tag: EcolE1_01003882
	EcolE1_01003882	-74	4.8	AGAAATAGTTATCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fyuA
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895	CKO_00905	-74	4.6	AGAAATAGTTATCATTTTC
Citrobacter koseri ATCC BAA-895	CKO_01243	-74	4.6	AGAAATAGTTATCATTTTC
Yersinia pestis KIM	y2404	-74	4.6	AGAAATAGTTATCATTTTC
Proteus mirabilis HI4320	PMI2596	-64	4.2	GCAAATGATATTAATTCGC
		-58	4.4	GATATTAATTCGCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1	plu2316	-160	5.1	ATTAATGAGAATCATTATC
		-154	4.6	GAGAATCATTATCAATAGT

Position: -90 Score: 5 Sequence: GTGAATAATAACCATTATC Position: -84 Score: 4.8 Sequence: AATAACCATTATCAATAAC Locus tag: EcolE1_01003888
	EcolE1_01003888	-90	5	GTGAATAATAACCATTATC
		-84	4.8	AATAACCATTATCAATAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybtA
Ortholog function: AraC-type transcriptional regulator for yersiniabactin uptake and biosynthetic genes
Citrobacter koseri ATCC BAA-895	CKO_00912	-90	4.7	GTGAATAATAACCATTATC
		-84	4.6	AATAACCATTATCAATAAC
Citrobacter koseri ATCC BAA-895	CKO_01249	-90	4.7	GTGAATAATAACCATTATC
		-84	4.6	AATAACCATTATCAATAAC
Yersinia pestis KIM	y2398	-90	4.7	GTGAATAATAACCATTATC
		-84	4.6	AATAACCATTATCAATAAC

Position: -185 Score: 5 Sequence: GATAATGGTTATTATTCAC Locus tag: EcolE1_01003889
	EcolE1_01003889	-185	5	GATAATGGTTATTATTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybtP
Ortholog function: yersiniabactin-iron ABC transporter, ATPase/permease components
Citrobacter koseri ATCC BAA-895	CKO_01250	-191	4.4	GTTATTGATAATGGTTATT
		-185	4.7	GATAATGGTTATTATTCAC
Citrobacter koseri ATCC BAA-895	CKO_00913	-191	4.4	GTTATTGATAATGGTTATT
		-185	4.7	GATAATGGTTATTATTCAC
Yersinia pestis KIM	y2397	-101	4.4	GTTATTGATAATGGTTATT
		-95	4.7	GATAATGGTTATTATTCAC

Position: -266 Score: 4.3 Sequence: TGGATTGATAATTGTTATC Position: -260 Score: 4.5 Sequence: GATAATTGTTATCGTTTGC Locus tag: EcolE1_01004006
	EcolE1_01004006	-266	4.3	TGGATTGATAATTGTTATC
		-260	4.5	GATAATTGTTATCGTTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cirA
Ortholog function: TonB-dependent ferric iron-catecholate receptor
Escherichia coli str. K-12 substr. MG1655	b2155	-201	4.3	TGGATTGATAATTGTTATC
		-195	4.4	GATAATTGTTATCGTTTGC

Position: -38 Score: 4.5 Sequence: ATAAATGATACTCACTCTC Locus tag: EcolE1_01004080
	EcolE1_01004080	-38	4.5	ATAAATGATACTCACTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdiA
Ortholog function: transcriptional regulator of ftsQAZ gene cluster (LuxR/UhpA family)
Escherichia coli str. K-12 substr. MG1655	b1916	-38	4.4	ATAAATGATACTCACTCTC
Salmonella typhimurium LT2	STM1950	-44	4.4	ATTCATAATAATGATTATC
		-38	5.3	AATAATGATTATCAATATC
Citrobacter koseri ATCC BAA-895	CKO_01029	-44	4.4	AAACATTATAATGATTATC
		-38	5	TATAATGATTATCAATCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02414	-78	4.6	ATTTATAATAATGATTATC
		-72	4.4	AATAATGATTATCAATCAG
Enterobacter sp. 638	Ent638_2503	-39	4.2	AATAATGATTAGTTTTTTC

Position: -331 Score: 4.3 Sequence: TAATATTATTTTTATTTTC Position: -268 Score: 4.6 Sequence: TCAAATGATAATAAATATC Locus tag: EcolE1_01004503
	EcolE1_01004503	-331	4.3	TAATATTATTTTTATTTTC
		-268	4.6	TCAAATGATAATAAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydhY
Ortholog function: oxidoreductase, Fe-S subunit
Escherichia coli str. K-12 substr. MG1655	b1674	-267	4.5	TCAAATGATAATAAATATC
Citrobacter koseri ATCC BAA-895	CKO_01699	-215	4.4	CTAAATGATAATAAATATC
Proteus mirabilis HI4320	PMI0070	-300	4.1	ACTAACGATAATTAATTTT

Position: -83 Score: 5 Sequence: TATAATGATACGCATTATC Locus tag: EcolE1_01004678
	EcolE1_01004678	-83	5	TATAATGATACGCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: ferric uptake transcription regulator
Escherichia coli str. K-12 substr. MG1655	b0683	-83	4.9	TATAATGATACGCATTATC
Salmonella typhimurium LT2	STM0693	-82	4.9	TATAATGATACGCATTATC
Enterobacter sp. 638	Ent638_1198	-83	4.5	TATAATGAAACGCATTATC
Edwardsiella tarda EIB202	ETAE_2610	-193	4.4	TATAATGAATCTCACTATT
Proteus mirabilis HI4320	PMI0543	-179	4.2	AATATTGAGAATGATAATT
		-173	4.5	GAGAATGATAATTATTCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu1327	-106	4.2	GGTTTTCATTTTCATTAGC

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fur regulog to Escherichia coli E110019

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --