Propagation of CcpA regulog to Bacillus cereus subsp. cytotoxis NVH 391-98
| Source regulog: | CcpA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus cereus subsp. cytotoxis NVH 391-98 |
| Orthologous TF(s) | Bcer98_3342 |
| Regulated genes | 20 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -75
Score: 4.5 Sequence: ATGTAAACGCATTTAT
Locus tag: Bcer98_0141
|
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| Bcer98_0141 | -75 | 4.5 | ATGTAAACGCATTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mrp | ||||
| Ortholog function: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0142 | -34 | 4 | GTGAAACCGAATACAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_001800 | -32 | 4.1 | TTGTAAACGAATACAC |
| Bacillus cereus ATCC 14579 | BC0168 | -84 | 4.5 | ATGTAAACGCATTTAT |
| Bacillus licheniformis DSM 13 | BLi00172 | -31 | 4.5 | TTGTAAACGAATACAA |
| Bacillus pumilus SAFR-032 | BPUM_0145 | -35 | 4.6 | TTGTAAACGAATTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU01540 | -32 | 4.1 | TTGTAAACGAATACAC |
|
Position: -201
Score: 4.7 Sequence: TTGACACCGCTTTCAT
Position: -34
Score: 4.8 Sequence: TTGTAAGCGTTTAATT
Locus tag: Bcer98_0806
|
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| Bcer98_0806 | -201 | 4.7 | TTGACACCGCTTTCAT | |
| -34 | 4.8 | TTGTAAGCGTTTAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: Glycerol uptake facilitator protein | ||||
| Bacillus cereus ATCC 14579 | BC1034 | -191 | 4.7 | TTGACACCGCTTTCAT |
| Bacillus clausii KSM-K16 | ABC3383 | -198 | 4.2 | ATGTATCCGTTTACAA |
| Bacillus licheniformis DSM 13 | BLi00994 | -207 | 4.5 | TTGACAACGCTTTCAC |
| Bacillus pumilus SAFR-032 | BPUM_0882 | -191 | 4.9 | TTGACAACGTTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU09280 | -182 | 4.7 | TTGACACCGCTTTCAT |
| Geobacillus kaustophilus HTA426 | GK1359 | -206 | 5.1 | TTGACAGCGTTTTCAA |
| Oceanobacillus iheyensis HTE831 | OB2476 | -164 | 4.7 | TTGACAACGCTTTCAG |
|
Position: -162
Score: 4.5 Sequence: TTAAAACCGCTTACTT
Locus tag: Bcer98_1327
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| Bcer98_1327 | -162 | 4.5 | TTAAAACCGCTTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cspD | ||||
| Ortholog function: Cold-shock protein, molecular chaperone, RNA-helicase co-factor | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_020070 | -87 | 4.4 | TTAACAACGTTTACAT |
| Bacillus licheniformis DSM 13 | BLi02332 | -178 | 5 | TTGAAAACGATTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU21930 | -184 | 4.8 | ATAAAAGCGGTTACAT |
|
Position: -56
Score: 4.5 Sequence: TTGTAAAGGCTTACAA
Locus tag: Bcer98_1724
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| Bcer98_1724 | -56 | 4.5 | TTGTAAAGGCTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mmgD | ||||
| Ortholog function: Citrate synthase (si) (EC 2.3.3.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0504 | -107 | 4.6 | ATGTAAGCATTTTCTT |
| Anoxybacillus flavithermus WK1 | Aflv_0504 | -107 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026180 | -114 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_022420 | -43 | 4.6 | GTGTAAGCGTTATCTT |
| Bacillus clausii KSM-K16 | ABC1805 | -63 | 4.9 | ATGTAAGCGCTTTATT |
| Bacillus clausii KSM-K16 | ABC2715 | 174 | 4.6 | TTGGAATCGTTTTCAA |
| Bacillus licheniformis DSM 13 | BLi03062 | -115 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus licheniformis DSM 13 | BLi03062 | -115 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2556 | -111 | 4.6 | ATGTAAGCATTTTCTT |
| -69 | 4.5 | TGGATAGCGCTTTCAA | ||
| Bacillus pumilus SAFR-032 | BPUM_2556 | -111 | 4.6 | ATGTAAGCATTTTCTT |
| -69 | 4.5 | TGGATAGCGCTTTCAA | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU24140 | -37 | 4.9 | TTGTAAGCGCTGTCTA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29140 | -114 | 4.6 | ATGTAAGCATTTTCTT |
| Oceanobacillus iheyensis HTE831 | OB2269 | -39 | 4.4 | TTGACTGCGCTTTCAA |
|
Position: -56
Score: 5.3 Sequence: TTGTAAACGTTTTCAT
Locus tag: Bcer98_2714
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| Bcer98_2714 | -56 | 5.3 | TTGTAAACGTTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cycB | ||||
| Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein | ||||
| Bacillus clausii KSM-K16 | ABC3520 | -37 | 4.6 | AAGAAAGCGGTTACTT |
| Bacillus halodurans C-125 | BH2019 | -55 | 4.4 | TATAAAACGCTTTCAT |
| Bacillus pumilus SAFR-032 | BPUM_3613 | -51 | 4.8 | AAGAAAGCGTTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU34160 | -39 | 5 | TTTAAAGCGCTTTCAT |
|
Position: -229
Score: 4.5 Sequence: AAGAAAGCGCAAACAT
Locus tag: Bcer98_2786
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| Bcer98_2786 | -229 | 4.5 | AAGAAAGCGCAAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: drm | ||||
| Ortholog function: Phosphopentomutase (EC 5.4.2.7) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0998 | -114 | 4.9 | ATGAAAACGTTTTATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_021610 | -74 | 4.5 | ATGTAAACGGTTTATA |
| Bacillus cereus ATCC 14579 | BC4087 | -222 | 4.5 | AAGAAAGCGTAAACAT |
| Bacillus licheniformis DSM 13 | BLi02500 | -99 | 4.1 | GTGTAAACGGTTTATA |
| Bacillus pumilus SAFR-032 | BPUM_2081 | -82 | 4.5 | TTGTAAACGGTTTATA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU23500 | -77 | 4.7 | ATGAAAACGGTTTATA |
|
Position: -55
Score: 4.3 Sequence: ATGTGAACGTTTTCTT
Locus tag: Bcer98_2992
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| Bcer98_2992 | -55 | 4.3 | ATGTGAACGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqgQ | ||||
| Ortholog function: Hypothetical Cytosolic Protein | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0894 | -23 | 4.5 | TTGAAAACGCTTATAC |
| Bacillus cereus ATCC 14579 | BC4261 | -57 | 4.3 | ATGTGAACGTTTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2216 | -49 | 4.2 | CTGAAAGCGCATTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24860 | -79 | 4.7 | TTGTCAGCGTTTTCTT |
|
Position: -178
Score: 4.3 Sequence: ATGTATACGTTTTCTT
Locus tag: Bcer98_3217
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| Bcer98_3217 | -178 | 4.3 | ATGTATACGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase cytochrome b558 subunit | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025520 | -143 | 4.3 | ATGTACACGTTTTCTT |
| Bacillus cereus ATCC 14579 | BC4518 | -178 | 4.3 | ATGTATACGTTTTCTT |
| Bacillus clausii KSM-K16 | ABC2664 | -190 | 4.3 | TTGAATCCGTTTTCTT |
| Bacillus licheniformis DSM 13 | BLi02994 | -143 | 4.4 | ATGTACGCGTTTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2503 | -139 | 4.2 | ATGTACGCGGTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28450 | -139 | 4.4 | ATGTACGCGTTTTCTT |
|
Position: 6
Score: 4.4 Sequence: ATGGAAACGCTTCCTG
Locus tag: Bcer98_3335
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| Bcer98_3335 | 6 | 4.4 | ATGGAAACGCTTCCTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acsA | ||||
| Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0462 | 237 | 4.9 | ATGAAAGAGTTTTCAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_026800 | -102 | 4.5 | TATAAAGCGTTTTCAA |
| Bacillus clausii KSM-K16 | ABC2760 | -65 | 4.7 | TTGAAAACGTTACCTT |
| 0 | 4.8 | ATGAAAGCGCTTCCTG | ||
| Bacillus halodurans C-125 | BH3234 | 6 | 4.4 | TTGCAAGCGCTTCCAG |
| Bacillus licheniformis DSM 13 | BLi03119 | 6 | 4.7 | TTGAAAGCGCTGCCAG |
| Bacillus pumilus SAFR-032 | BPUM_2616 | -30 | 4.7 | TTGTAAACGTATGCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29680 | -101 | 4.5 | TATAAAGCGTTTTCAA |
| 6 | 4.8 | TTGAAAGCGTTACCAG | ||
| Oceanobacillus iheyensis HTE831 | OB0022 | -36 | 4.5 | TTGTAATCGTTTGCAA |
| Paenibacillus sp. JDR-2 | Pjdr2_3796 | -56 | 5 | TTGAAAGCGTATTCTT |
|
Position: -184
Score: 4.5 Sequence: AAAAAAGCGTTTACAT
Locus tag: Bcer98_3856
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| Bcer98_3856 | -184 | 4.5 | AAAAAAGCGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iolJ | ||||
| Ortholog function: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) | ||||
| Bacillus cereus ATCC 14579 | BC5335 | -184 | 4.5 | AAAAAAGCGTTTACAT |
| Paenibacillus sp. JDR-2 | Pjdr2_6054 | -236 | 4.5 | ATTATAGCGCTTACAA |
|
Position: -68
Score: 4.8 Sequence: TTGTAAACGCTTACCT
Locus tag: Bcer98_3957
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| Bcer98_3957 | -68 | 4.8 | TTGTAAACGCTTACCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lrgA | ||||
| Ortholog function: Antiholin-like protein LrgA | ||||
| Bacillus cereus ATCC 14579 | BC5439 | -59 | 5 | ATGTAAACGCTTACTT |
| Bacillus licheniformis DSM 13 | BLi03037 | -68 | 4.8 | TTGAAAACGCTTTTTT |
| Bacillus pumilus SAFR-032 | BPUM_2534 | -68 | 4.5 | TTGTAAACGCTTCATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28910 | -68 | 4.9 | TTGTAAGCGCTTTATA |