Propagation of CcpA regulog to Bacillus cereus subsp. cytotoxis NVH 391-98

Reference regulog properties
Source regulog:	CcpA - Bacillales
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:
Biological process:	Carbon catabolism
Effector:	HPr, phosphocarrier protein
Phylum:	Firmicutes
Propagated regulon:
Target genome	Bacillus cereus subsp. cytotoxis NVH 391-98
Orthologous TF(s)	Bcer98_3342
Regulated genes	20

Built upon 559 sites [see more]

Predicted regulatory interactions in *Bacillus cereus subsp. cytotoxis NVH 391-98*
	Locus tag	Position	Score	Sequence
Position: -75 Score: 4.5 Sequence: ATGTAAACGCATTTAT Locus tag: Bcer98_0141
	Bcer98_0141	-75	4.5	ATGTAAACGCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mrp
Ortholog function: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Anoxybacillus flavithermus WK1	Aflv_0142	-34	4	GTGAAACCGAATACAT
Bacillus amyloliquefaciens FZB42	RBAM_001800	-32	4.1	TTGTAAACGAATACAC
Bacillus cereus ATCC 14579	BC0168	-84	4.5	ATGTAAACGCATTTAT
Bacillus licheniformis DSM 13	BLi00172	-31	4.5	TTGTAAACGAATACAA
Bacillus pumilus SAFR-032	BPUM_0145	-35	4.6	TTGTAAACGAATTCAA
Bacillus subtilis subsp. subtilis str. 168	BSU01540	-32	4.1	TTGTAAACGAATACAC

Position: -201 Score: 4.7 Sequence: TTGACACCGCTTTCAT Position: -34 Score: 4.8 Sequence: TTGTAAGCGTTTAATT Locus tag: Bcer98_0806
	Bcer98_0806	-201	4.7	TTGACACCGCTTTCAT
		-34	4.8	TTGTAAGCGTTTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: Glycerol uptake facilitator protein
Bacillus cereus ATCC 14579	BC1034	-191	4.7	TTGACACCGCTTTCAT
Bacillus clausii KSM-K16	ABC3383	-198	4.2	ATGTATCCGTTTACAA
Bacillus licheniformis DSM 13	BLi00994	-207	4.5	TTGACAACGCTTTCAC
Bacillus pumilus SAFR-032	BPUM_0882	-191	4.9	TTGACAACGTTTTCAT
Bacillus subtilis subsp. subtilis str. 168	BSU09280	-182	4.7	TTGACACCGCTTTCAT
Geobacillus kaustophilus HTA426	GK1359	-206	5.1	TTGACAGCGTTTTCAA
Oceanobacillus iheyensis HTE831	OB2476	-164	4.7	TTGACAACGCTTTCAG

Position: -162 Score: 4.5 Sequence: TTAAAACCGCTTACTT Locus tag: Bcer98_1327
	Bcer98_1327	-162	4.5	TTAAAACCGCTTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cspD
Ortholog function: Cold-shock protein, molecular chaperone, RNA-helicase co-factor
Bacillus amyloliquefaciens FZB42	RBAM_020070	-87	4.4	TTAACAACGTTTACAT
Bacillus licheniformis DSM 13	BLi02332	-178	5	TTGAAAACGATTTCAA
Bacillus subtilis subsp. subtilis str. 168	BSU21930	-184	4.8	ATAAAAGCGGTTACAT

Position: -56 Score: 4.5 Sequence: TTGTAAAGGCTTACAA Locus tag: Bcer98_1724
	Bcer98_1724	-56	4.5	TTGTAAAGGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mmgD
Ortholog function: Citrate synthase (si) (EC 2.3.3.1)
Anoxybacillus flavithermus WK1	Aflv_0504	-107	4.6	ATGTAAGCATTTTCTT
Anoxybacillus flavithermus WK1	Aflv_0504	-107	4.6	ATGTAAGCATTTTCTT
Bacillus amyloliquefaciens FZB42	RBAM_026180	-114	4.6	ATGTAAGCATTTTCTT
Bacillus amyloliquefaciens FZB42	RBAM_022420	-43	4.6	GTGTAAGCGTTATCTT
Bacillus clausii KSM-K16	ABC1805	-63	4.9	ATGTAAGCGCTTTATT
Bacillus clausii KSM-K16	ABC2715	174	4.6	TTGGAATCGTTTTCAA
Bacillus licheniformis DSM 13	BLi03062	-115	4.6	ATGTAAGCATTTTCTT
Bacillus licheniformis DSM 13	BLi03062	-115	4.6	ATGTAAGCATTTTCTT
Bacillus pumilus SAFR-032	BPUM_2556	-111	4.6	ATGTAAGCATTTTCTT
		-69	4.5	TGGATAGCGCTTTCAA
Bacillus pumilus SAFR-032	BPUM_2556	-111	4.6	ATGTAAGCATTTTCTT
		-69	4.5	TGGATAGCGCTTTCAA
Bacillus subtilis subsp. subtilis str. 168	BSU24140	-37	4.9	TTGTAAGCGCTGTCTA
Bacillus subtilis subsp. subtilis str. 168	BSU29140	-114	4.6	ATGTAAGCATTTTCTT
Oceanobacillus iheyensis HTE831	OB2269	-39	4.4	TTGACTGCGCTTTCAA

Position: -56 Score: 5.3 Sequence: TTGTAAACGTTTTCAT Locus tag: Bcer98_2714
	Bcer98_2714	-56	5.3	TTGTAAACGTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cycB
Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein
Bacillus clausii KSM-K16	ABC3520	-37	4.6	AAGAAAGCGGTTACTT
Bacillus halodurans C-125	BH2019	-55	4.4	TATAAAACGCTTTCAT
Bacillus pumilus SAFR-032	BPUM_3613	-51	4.8	AAGAAAGCGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168	BSU34160	-39	5	TTTAAAGCGCTTTCAT

Position: -229 Score: 4.5 Sequence: AAGAAAGCGCAAACAT Locus tag: Bcer98_2786
	Bcer98_2786	-229	4.5	AAGAAAGCGCAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: drm
Ortholog function: Phosphopentomutase (EC 5.4.2.7)
Anoxybacillus flavithermus WK1	Aflv_0998	-114	4.9	ATGAAAACGTTTTATA
Bacillus amyloliquefaciens FZB42	RBAM_021610	-74	4.5	ATGTAAACGGTTTATA
Bacillus cereus ATCC 14579	BC4087	-222	4.5	AAGAAAGCGTAAACAT
Bacillus licheniformis DSM 13	BLi02500	-99	4.1	GTGTAAACGGTTTATA
Bacillus pumilus SAFR-032	BPUM_2081	-82	4.5	TTGTAAACGGTTTATA
Bacillus subtilis subsp. subtilis str. 168	BSU23500	-77	4.7	ATGAAAACGGTTTATA

Position: -55 Score: 4.3 Sequence: ATGTGAACGTTTTCTT Locus tag: Bcer98_2992
	Bcer98_2992	-55	4.3	ATGTGAACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqgQ
Ortholog function: Hypothetical Cytosolic Protein
Anoxybacillus flavithermus WK1	Aflv_0894	-23	4.5	TTGAAAACGCTTATAC
Bacillus cereus ATCC 14579	BC4261	-57	4.3	ATGTGAACGTTTTCTT
Bacillus pumilus SAFR-032	BPUM_2216	-49	4.2	CTGAAAGCGCATTTAT
Bacillus subtilis subsp. subtilis str. 168	BSU24860	-79	4.7	TTGTCAGCGTTTTCTT

Position: -178 Score: 4.3 Sequence: ATGTATACGTTTTCTT Locus tag: Bcer98_3217
	Bcer98_3217	-178	4.3	ATGTATACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b558 subunit
Bacillus amyloliquefaciens FZB42	RBAM_025520	-143	4.3	ATGTACACGTTTTCTT
Bacillus cereus ATCC 14579	BC4518	-178	4.3	ATGTATACGTTTTCTT
Bacillus clausii KSM-K16	ABC2664	-190	4.3	TTGAATCCGTTTTCTT
Bacillus licheniformis DSM 13	BLi02994	-143	4.4	ATGTACGCGTTTTCTT
Bacillus pumilus SAFR-032	BPUM_2503	-139	4.2	ATGTACGCGGTTTCTT
Bacillus subtilis subsp. subtilis str. 168	BSU28450	-139	4.4	ATGTACGCGTTTTCTT

Position: 6 Score: 4.4 Sequence: ATGGAAACGCTTCCTG Locus tag: Bcer98_3335
	Bcer98_3335	6	4.4	ATGGAAACGCTTCCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Anoxybacillus flavithermus WK1	Aflv_0462	237	4.9	ATGAAAGAGTTTTCAA
Bacillus amyloliquefaciens FZB42	RBAM_026800	-102	4.5	TATAAAGCGTTTTCAA
Bacillus clausii KSM-K16	ABC2760	-65	4.7	TTGAAAACGTTACCTT
		0	4.8	ATGAAAGCGCTTCCTG
Bacillus halodurans C-125	BH3234	6	4.4	TTGCAAGCGCTTCCAG
Bacillus licheniformis DSM 13	BLi03119	6	4.7	TTGAAAGCGCTGCCAG
Bacillus pumilus SAFR-032	BPUM_2616	-30	4.7	TTGTAAACGTATGCAA
Bacillus subtilis subsp. subtilis str. 168	BSU29680	-101	4.5	TATAAAGCGTTTTCAA
		6	4.8	TTGAAAGCGTTACCAG
Oceanobacillus iheyensis HTE831	OB0022	-36	4.5	TTGTAATCGTTTGCAA
Paenibacillus sp. JDR-2	Pjdr2_3796	-56	5	TTGAAAGCGTATTCTT

Position: -184 Score: 4.5 Sequence: AAAAAAGCGTTTACAT Locus tag: Bcer98_3856
	Bcer98_3856	-184	4.5	AAAAAAGCGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: iolJ
Ortholog function: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Bacillus cereus ATCC 14579	BC5335	-184	4.5	AAAAAAGCGTTTACAT
Paenibacillus sp. JDR-2	Pjdr2_6054	-236	4.5	ATTATAGCGCTTACAA

Position: -68 Score: 4.8 Sequence: TTGTAAACGCTTACCT Locus tag: Bcer98_3957
	Bcer98_3957	-68	4.8	TTGTAAACGCTTACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lrgA
Ortholog function: Antiholin-like protein LrgA
Bacillus cereus ATCC 14579	BC5439	-59	5	ATGTAAACGCTTACTT
Bacillus licheniformis DSM 13	BLi03037	-68	4.8	TTGAAAACGCTTTTTT
Bacillus pumilus SAFR-032	BPUM_2534	-68	4.5	TTGTAAACGCTTCATT
Bacillus subtilis subsp. subtilis str. 168	BSU28910	-68	4.9	TTGTAAGCGCTTTATA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of CcpA regulog to Bacillus cereus subsp. cytotoxis NVH 391-98

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --