Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Limnobacter sp. MED105

Reference regulog properties
Source regulog: Fur - Ralstonia
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Limnobacter sp. MED105
Orthologous TF(s) LMED105_01738
Regulated genes 5
Built upon 94 sites [see more]
Predicted regulatory interactions in Limnobacter sp. MED105
Locus tag Position Score Sequence
Position: -55
Score: 5.9
Sequence: AATGATAATAATTATCATT
Locus tag: LMED105_10265
LMED105_10265 -55 5.9 AATGATAATAATTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Rmet_1108
Ortholog function: putative TonB-dependent siderophore transporter
Ralstonia metallidurans CH34 Rmet_1108 -167 4.8 AATGCAAATGATTAGTATT
Position: -51
Score: 5.2
Sequence: AGTAAGAATAATTATCATT
Locus tag: LMED105_14790
LMED105_14790 -51 5.2 AGTAAGAATAATTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: h16_B1678
Ortholog function: hypothetical protein
Ralstonia eutropha H16 H16_B1678 -195 4.7 AATGAGAATGATTATCAGG
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