Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NrdR regulog to Limnobacter sp. MED105

Reference regulog properties
Source regulog: NrdR - Ralstonia
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Limnobacter sp. MED105
Orthologous TF(s) LMED105_16183
Regulated genes 1
Built upon 18 sites [see more]
Predicted regulatory interactions in Limnobacter sp. MED105
Locus tag Position Score Sequence
Position: -108
Score: 5.2
Sequence: ACACAAGATATAGTGG
Locus tag: LMED105_06988
LMED105_06988 -108 5.2 ACACAAGATATAGTGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdA
Ortholog function: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Ralstonia solanacearum GMI1000 RSc2805 -220 3.7 CCACTATACTTAGTGC
-189 5.3 ACACTAGATATAGTGG
Ralstonia pickettii 12J Rpic_3047 -232 3.6 CCACTATACTTAGCGT
-201 5.2 ACACTAGATGTAGTGG
Ralstonia metallidurans CH34 Rmet_3088 -251 5 CCACTACATCTAGTGG
Ralstonia eutropha JMP134 Reut_A2941 -239 4.9 CCACTATATCTAGTAG
Ralstonia eutropha H16 H16_A3235 -240 5 ACACTATATCTAGTAG
Cupriavidus taiwanensis RALTA_A2686 -251 4.8 CCACTACATCTAGTAG