Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LexA regulog to Paenibacillus larvae subsp. larvae BRL-230010

Reference regulog properties
Source regulog: LexA - Bacillales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus larvae subsp. larvae BRL-230010
Orthologous TF(s) Plarl_010100024378
Regulated genes 3
Built upon 206 sites [see more]
Predicted regulatory interactions in Paenibacillus larvae subsp. larvae BRL-230010
Locus tag Position Score Sequence
Position: -68
Score: 4.1
Sequence: ACGAATAATTGTCCGC
Position: -36
Score: 4.7
Sequence: AAGAACACATGTTCTA
Locus tag: Plarl_010100018732
Plarl_010100018732 -68 4.1 ACGAATAATTGTCCGC
-36 4.7 AAGAACACATGTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqjW
Ortholog function: DNA polymerase IV (EC 2.7.7.7)
Bacillus subtilis subsp. subtilis str. 168 BSU23710 -57 4.7 ACGAACATACTTTCGC
-29 4.9 GCGAACATAAGTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_021830 -28 4.3 CAGAACAAATGTTCCC
Bacillus pumilus SAFR-032 BPUM_2102 -29 4.9 CAGAACATACGTTCTA
Bacillus halodurans C-125 BH2741 -57 4 ACGAACAAATATTCAC
-30 5 CAGAACAAATGTTCTT
Bacillus clausii KSM-K16 ABC3826 -85 4.1 CCGAACGTCTATTCGT
Paenibacillus sp. JDR-2 Pjdr2_3737 -66 4.2 GCGAACATACATTCGG
-37 4.7 ACGAACATACTTTCGC
Position: -56
Score: 5.1
Sequence: ACAAACATTCGTTCGT
Locus tag: Plarl_010100024373
Plarl_010100024373 -56 5.1 ACAAACATTCGTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Pjdr2_2622
Ortholog function: Peptidoglycan-binding protein
Paenibacillus sp. JDR-2 Pjdr2_2622 -129 4.2 TAGAACCGGAGTTCGT
-113 5.1 ACAAACATAAGTTCTT
-97 4.8 AAAAACAAAAGTTCGC
-67 5 GCAAACATTTGTTCGT
-28 4.7 CAGAACAAACGTTCGG
Position: -105
Score: 4.8
Sequence: ACGAACGAATGTTTGT
Position: -75
Score: 4.8
Sequence: AGGAACTTATGTTTGT
Locus tag: Plarl_010100024378
Plarl_010100024378 -105 4.8 ACGAACGAATGTTTGT
-75 4.8 AGGAACTTATGTTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response transcriptional repressor
Bacillus subtilis subsp. subtilis str. 168 BSU17850 -139 4.2 AGGAATGTTTGTTCGC
-102 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus amyloliquefaciens FZB42 RBAM_017650 -140 4.5 AAGAATGTTTGTTCGC
-103 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus pumilus SAFR-032 BPUM_1686 -142 4.6 TAGAATGTGTGTTCGT
-103 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus licheniformis DSM 13 BLi02032 -346 4.1 ATGAATTTGTGTTTGT
-141 4.2 CAGAATGTTTGTTCGG
-103 4.6 ACGAACAAATGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Anoxybacillus flavithermus WK1 Aflv_1506 -110 5.2 TAGAACATTTGTTTGT
-82 4.8 GAGAACTTTTGTTCGT
-53 5.2 TCGAACTTATGTTTGT
Geobacillus kaustophilus HTA426 GK1328 -136 4.5 TAGAATGTTTGTTCGC
-103 4.9 AGGAACATTTGTTTGT
-74 5.1 TCGAACCTATGTTTGT
Bacillus cereus ATCC 14579 BC3690 -70 5.2 TCGAACTTATGTTTGT
Bacillus halodurans C-125 BH2356 -107 4.7 AAGAACACTTGTTTGT
-78 4.9 TAGAACTTATGTTTGC
Bacillus clausii KSM-K16 ABC2167 -107 4.6 AGGAACAACTGTTCGT
-76 4.9 TAGAACTTATGTTTGC
Oceanobacillus iheyensis HTE831 OB1669 -142 4.8 CAGAACAATTGTTCTT
-107 4.6 CCGAACATATGATCTT
-78 4.2 TAGAACGAGTGTTTGC
Paenibacillus sp. JDR-2 Pjdr2_2621 -157 4.4 CCGAACGTTTGTTCTG
-118 5.1 ACGAACAAATGTTTGC
-72 5.1 AAGAACTTATGTTTGT
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