Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Dnr regulog to Ralstonia pickettii 12J

Reference regulog properties
Source regulog: Dnr - Ralstonia
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia pickettii 12J
Orthologous TF(s) Rpic_4660, Rpic_2109, Rpic_4428
Regulated genes 1
Built upon 9 sites [see more]
Predicted regulatory interactions in Ralstonia pickettii 12J
Locus tag Position Score Sequence
Position: -136
Score: 4.7
Locus tag: Rpic_4059
Supported by regulated orthologs from reference regulons
Ortholog gene name: nosZ
Ortholog function: nitrous oxide reductase
Ralstonia solanacearum GMI1000 RSp1368 -126 4.7 GTGTGACGAAAGTCAATT
Ralstonia pickettii 12J Rpic_4059 -136 4.7 GTGTGACGAAAGTCAATT
Ralstonia metallidurans CH34 Rmet_4917 -165 5.1 ACATGACTTATGTCAAGC
Ralstonia eutropha H16 PHG252 -110 5 TTTTGATTCGAGTCAAGT