Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HexR regulog to Ralstonia solanacearum GMI1000

Reference regulog properties
Source regulog: HexR - Ralstonia
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia solanacearum GMI1000
Orthologous TF(s) RSp1556
Regulated genes 2
Built upon 24 sites [see more]
Predicted regulatory interactions in Ralstonia solanacearum GMI1000
Locus tag Position Score Sequence
Position: -160
Score: 5.5
Sequence: ATGTAGTAATACTACAA
Locus tag: RSp1559
RSp1559 -160 5.5 ATGTAGTAATACTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: zwf
Ortholog function: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Ralstonia solanacearum GMI1000 RSp1559 -338 4.6 ATGTAATTTTCCTACAA
-160 5.5 ATGTAGTAATACTACAA
Ralstonia pickettii 12J Rpic_4867 -269 4.2 CTGTAATTTTCCTACAA
-93 5.7 TTGTAGTAATACTACAA
Position: -220
Score: 5.5
Sequence: TTGTAGTATTACTACAT
Locus tag: RSp1560
RSp1560 -220 5.5 TTGTAGTATTACTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: edd
Ortholog function: Phosphogluconate dehydratase (EC 4.2.1.12)
Ralstonia solanacearum GMI1000 RSp1560 -220 5.5 TTGTAGTATTACTACAT
-42 4.6 TTGTAGGAAAATTACAT
Ralstonia pickettii 12J Rpic_4868 -231 5.7 TTGTAGTATTACTACAA
-55 4.2 TTGTAGgAAAatTACAg
Ralstonia metallidurans CH34 Rmet_1045 -209 4.9 ATGTAGAGATTCTACAC
-67 5.7 ATGTAGAAATTCTACAT
Ralstonia eutropha JMP134 Reut_A1081 -203 5.8 ATGTAGATATTCTACAA
-62 5.7 ATGTAGAAAATCTACAT
Ralstonia eutropha H16 H16_A1178 -222 5.2 ATGTAGAGATTCTACAT
-71 5.3 CTGTAGAAAATCTACAT
Cupriavidus taiwanensis RALTA_A1158 -223 5.2 ATGTAGAGATTCTACAT
-71 4.9 CTGTAGAAAATCTACAG
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