Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Herminiimonas arsenicoxydans

Reference regulog properties
Source regulog: Zur - Ralstonia
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode:
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Herminiimonas arsenicoxydans
Orthologous TF(s) HEAR2958
Regulated genes 2
Built upon 19 sites [see more]
Predicted regulatory interactions in Herminiimonas arsenicoxydans
Locus tag Position Score Sequence
Position: -147
Score: 5.9
Sequence: AATTTGCAACCTTGTTGCATCTA
Locus tag: HEAR0272
HEAR0272 -147 5.9 AATTTGCAACCTTGTTGCATCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: zip
Ortholog function: Zinc transporter, ZIP family
Ralstonia solanacearum GMI1000 RS01372 -37 5.9 TTCTTGCAACTCTGTTGCGTTTG
Ralstonia pickettii 12J Rpic_2432 -48 6 TTCTTGCAACTCTGTTGCGTTTA
Ralstonia metallidurans CH34 Rmet_2621 -26 6.4 TTTTTGCAACATTGTTGCGTTAA
Ralstonia eutropha JMP134 Reut_A0876 -3 6.3 TTGTTGCAACATTGTTGCGTTTG
Ralstonia eutropha H16 H16_A2738 -35 6.4 TTATTGCAACATTGTTGCGTTAG
Cupriavidus taiwanensis RALTA_A2241 -35 6.4 TTATTGCAACATTGTTGCGTTTG
Position: 6
Score: 5.4
Sequence: AAATTGCAACTGAATTGCAAATT
Locus tag: HEAR2958
HEAR2958 6 5.4 AAATTGCAACTGAATTGCAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: zur
Ortholog function: Zinc uptake regulator, Fur family
Ralstonia pickettii 12J Rpic_3702 -50 5.2 CAATTGCAACTCAATTGCAGCAA