Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NsrR regulog to Herminiimonas arsenicoxydans

Reference regulog properties
Source regulog: NsrR - Ralstonia
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Herminiimonas arsenicoxydans
Orthologous TF(s) HEAR1666, HEAR0652
Regulated genes 4
Built upon 23 sites [see more]
Predicted regulatory interactions in Herminiimonas arsenicoxydans
Locus tag Position Score Sequence
Position: -54
Score: 4.7
Sequence: GTTGCTTTTTAAATGCATA
Locus tag: HEAR0652
HEAR0652 -54 4.7 GTTGCTTTTTAAATGCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nsrR
Ortholog function: Nitrite-sensitive transcriptional repressor NsrR
Ralstonia eutropha H16 H16_A3534 -39 5.3 CTTGCATCCTGGATGCATC
Cupriavidus taiwanensis RALTA_A2987 -40 5.5 CTTGCATCCTAGATGCATC
Ralstonia metallidurans CH34 Rmet_3383 -25 5.5 CTTGCATTGGCGATGCACG
Ralstonia eutropha JMP134 Reut_A3220 -39 4.6 CTTGCATTTGAAATGCCGC
Position: -84
Score: 3.7
Sequence: AGTGCGATTCGTATGAATG
Position: -31
Score: 4
Sequence: GGTGTATTTCAAATACAAC
Locus tag: HEAR0653
HEAR0653 -84 3.7 AGTGCGATTCGTATGAATG
-31 4 GGTGTATTTCAAATACAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmp
Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Ralstonia eutropha H16 H16_A3533 -41 5.6 CATGCATTTAATTTGCATG
Cupriavidus taiwanensis RALTA_A2986 -40 4.6 CATGCATATTTTCTGCATG
Ralstonia metallidurans CH34 Rmet_3382 32 6 CATGCATTTTACATGCATG
Ralstonia eutropha JMP134 Reut_A3219 -41 5.5 CATGCATTTTGTTTGCATG
Ralstonia solanacearum GMI1000 RS01706 -133 4.3 GTGGTATTTAATATGCATG
Ralstonia pickettii 12J Rpic_3609 -32 3.6 GTTGCATATTTCACGCATA
Position: -225
Score: 3.6
Sequence: GTTTCCTTGTGAATGAAGT
Position: -214
Score: 3.6
Sequence: AATGAAGTTGAATTGCAAT
Position: -165
Score: 4.8
Sequence: GATTCATTCTATGTGCATG
Position: -161
Score: 3.6
Sequence: CATTCTATGTGCATGTATT
Position: -142
Score: 3.6
Sequence: AATGCATGCAAATAAAATG
Position: -138
Score: 5.5
Sequence: CATGCAAATAAAATGCATC
Locus tag: HEAR1666
HEAR1666 -225 3.6 GTTTCCTTGTGAATGAAGT
-214 3.6 AATGAAGTTGAATTGCAAT
-165 4.8 GATTCATTCTATGTGCATG
-161 3.6 CATTCTATGTGCATGTATT
-142 3.6 AATGCATGCAAATAAAATG
-138 5.5 CATGCAAATAAAATGCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nsrR
Ortholog function: Nitrite-sensitive transcriptional repressor NsrR
Ralstonia solanacearum GMI1000 RS01705 -134 4.3 CATGCATATTAAATACCAC
Ralstonia pickettii 12J Rpic_3608 -218 3.6 TATGCGTGAAATATGCAAC
Position: -112
Score: 5.5
Sequence: GATGCATTTTATTTGCATG
Locus tag: HEAR1667
HEAR1667 -112 5.5 GATGCATTTTATTTGCATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: norB
Ortholog function: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
Ralstonia solanacearum GMI1000 RSp1505 -103 3.7 CAAGTATCTGATATACATC
-53 5.8 GATGCATTCTCAATGCATC
Ralstonia pickettii 12J Rpic_4013 -101 4.3 CAAGCATCTGATATACATC
-51 5 GTTGCATCCTTAATGCATC
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