Propagation of FadP regulog to Burkholderia pseudomallei 112
| Source regulog: | FadP - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | |
| Biological process: | Fatty acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Burkholderia pseudomallei 112 |
| Orthologous TF(s) | Bpse112_010100003809 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -52
Score: 5.3 Sequence: TAGTACGGCCGTTCGA
Locus tag: Bpse112_010100003809
|
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| Bpse112_010100003809 | -52 | 5.3 | TAGTACGGCCGTTCGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadP | ||||
| Ortholog function: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family | ||||
| Ralstonia solanacearum GMI1000 | RS04423 | -136 | 5.7 | TTGAACGATCGTTCGA |
| Ralstonia pickettii 12J | Rpic_0347 | -136 | 5.6 | TTGAACGACCGTTCGA |
| Ralstonia metallidurans CH34 | Rmet_0384 | -142 | 4.9 | CTGAACGACCGTTCTT |
| Ralstonia eutropha JMP134 | Reut_A0445 | -140 | 4.9 | CTGAACGACCGTTCTT |
| Ralstonia eutropha H16 | H16_A0459 | -143 | 4.9 | CTGAACGACCGTTCTT |
| Cupriavidus taiwanensis | RALTA_A0402 | -141 | 4.9 | CTGAACGACCGTTCTT |
|
Position: -60
Score: 5.5 Sequence: TAGCACGGTCGTTCAA
Locus tag: Bpse112_010100007108
|
||||
| Bpse112_010100007108 | -60 | 5.5 | TAGCACGGTCGTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: RSc2046 | ||||
| Ortholog function: conserved hypothetical protein, DUF1178 | ||||
| Ralstonia solanacearum GMI1000 | RS03611 | -63 | 5.5 | TAGCACGACCGTTCAA |
| Ralstonia pickettii 12J | Rpic_2198 | -85 | 5.1 | GCGAACGGTCGTGCGA |
| -63 | 5.2 | TAGCACGACCGTTCAC | ||
| Ralstonia metallidurans CH34 | Rmet_0943 | -62 | 5.2 | TAGCACGACCGTTCAC |
| Ralstonia eutropha JMP134 | Reut_A0977 | -64 | 5.2 | TAGCACGACCGTTCAC |
| Ralstonia eutropha H16 | H16_A1066 | -87 | 5.3 | CCGAACGGTCGTTCTA |
| -64 | 5.2 | TAGCACGACCGTTCAC | ||
| Cupriavidus taiwanensis | RALTA_A1050 | -87 | 5.4 | ACGAACGGTCGTTCTA |
| -64 | 5.2 | TAGCACGACCGTTCAC | ||