Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Burkholderia graminis C4D1M

Reference regulog properties
Source regulog: Fur - Ralstonia
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia graminis C4D1M
Orthologous TF(s) BgramDRAFT_5327
Regulated genes 5
Built upon 94 sites [see more]
Predicted regulatory interactions in Burkholderia graminis C4D1M
Locus tag Position Score Sequence
Position: -157
Score: 4.4
Sequence: ATTGCGAACTATTATCATC
Position: -133
Score: 5.2
Sequence: AATGATACTGATTCTCATT
Locus tag: BgramDRAFT_3991
BgramDRAFT_3991 -157 4.4 ATTGCGAACTATTATCATC
-133 5.2 AATGATACTGATTCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Reut_A2876
Ortholog function: putative TonB-dependent siderophore transporter
Ralstonia pickettii 12J Rpic_3802 -136 4.8 ATTGAGAATCGTTGTCATT
Ralstonia metallidurans CH34 Rmet_3077 -42 4.2 AACGCGAATCGTTCGCATT
Ralstonia eutropha JMP134 Reut_A2876 -136 4.4 AACGCAAATCATTCGCATT
Position: -302
Score: 5.2
Sequence: AATGCAAATGATTCTTATT
Locus tag: BgramDRAFT_4608
BgramDRAFT_4608 -302 5.2 AATGCAAATGATTCTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mbtH
Ortholog function: Siderophore biosynthesis protein
Ralstonia eutropha H16 H16_B1689 -118 5.2 AATACAAATCATTATCATT
Position: -29
Score: 5.5
Sequence: AATGATAATAATTCGCATT
Locus tag: BgramDRAFT_4618
BgramDRAFT_4618 -29 5.5 AATGATAATAATTCGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: Bacterioferritin-associated ferredoxin
Ralstonia solanacearum GMI1000 RSc0349 -77 5 AACAAGAATTGTTCTCATT
Ralstonia pickettii 12J Rpic_0205 -75 5 AACAAGAATTGTTCTCATT
Ralstonia metallidurans CH34 Rmet_0247 -91 5.2 AATGGGAATTGTTATCATT
Ralstonia eutropha JMP134 Reut_A0298 -1 5.2 AAtGggAATTgTTATCaTT
Ralstonia eutropha H16 H16_A0327 -89 5.2 AATGGGAATTGTTATCATT
Cupriavidus taiwanensis RALTA_A0266 -56 5.2 AATGGGAATTGTTATCATT
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