Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NtrC regulog to Burkholderia graminis C4D1M

Reference regulog properties
Source regulog: NtrC - Ralstonia
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia graminis C4D1M
Orthologous TF(s) BgramDRAFT_4675
Regulated genes 3
Built upon 28 sites [see more]
Predicted regulatory interactions in Burkholderia graminis C4D1M
Locus tag Position Score Sequence
Position: -333
Score: 4.2
Sequence: CGCACCATCGCTGTGCT
Locus tag: BgramDRAFT_2455
BgramDRAFT_2455 -333 4.2 CGCACCATCGCTGTGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nasD
Ortholog function: Nitrite reductase, large subunit (EC 1.7.1.4)
Ralstonia solanacearum GMI1000 RSp1222 -258 4.8 TGCACCGAAACCGTGCA
Ralstonia pickettii 12J Rpic_4164 -272 4.4 TGCACCGAAAGCGTGCG
Ralstonia metallidurans CH34 Rmet_4818 -284 5 CGCACCATTGCCGTGCG
Ralstonia eutropha JMP134 Reut_B4860 -271 4.2 CGCACCATGACTGTGCC
Position: -343
Score: 4.8
Sequence: CGCACCATCATCGCGCG
Locus tag: BgramDRAFT_4503
BgramDRAFT_4503 -343 4.8 CGCACCATCATCGCGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nasE
Ortholog function: Nitrite reductase, small subunit (EC 1.7.1.4)
Ralstonia solanacearum GMI1000 RSp1221 -258 4.8 TGCACCGAAACCGTGCA
Ralstonia pickettii 12J Rpic_4165 -272 4.4 TGCACCGAAAGCGTGCG
Ralstonia metallidurans CH34 Rmet_4819 -284 5 CGCACCATTGCCGTGCG
Ralstonia eutropha JMP134 Reut_B4861 -271 4.2 CGCACCATGACTGTGCC