Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadP regulog to Burkholderia xenovorans LB400

Reference regulog properties
Source regulog: FadP - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia xenovorans LB400
Orthologous TF(s) Bxe_A4039
Regulated genes 6
Built upon 85 sites [see more]
Predicted regulatory interactions in Burkholderia xenovorans LB400
Locus tag Position Score Sequence
Position: -130
Score: 5.5
Sequence: TCGAACGATCGTTCTT
Locus tag: Bxe_A4276
Bxe_A4276 -130 5.5 TCGAACGATCGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nppD
Ortholog function: 2-nitropropane dioxygenase NPD
Ralstonia metallidurans CH34 Rmet_0222 -39 5.4 TCGAACGATCGTTCCA
Ralstonia eutropha JMP134 Reut_A0268 -58 5.2 TCGAACGACCGTTCAT
Ralstonia eutropha H16 H16_A0293 -59 5.2 TCGAACGACCGTTCAT
Cupriavidus taiwanensis RALTA_A0233 -58 5.2 TCGAACGACCGTTCAC
Position: -50
Score: 5.3
Sequence: TAGTACGGCCGTTCGA
Locus tag: Bxe_A4039
Bxe_A4039 -50 5.3 TAGTACGGCCGTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadP
Ortholog function: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Ralstonia solanacearum GMI1000 RS04423 -136 5.7 TTGAACGATCGTTCGA
Ralstonia pickettii 12J Rpic_0347 -136 5.6 TTGAACGACCGTTCGA
Ralstonia metallidurans CH34 Rmet_0384 -142 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha JMP134 Reut_A0445 -140 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha H16 H16_A0459 -143 4.9 CTGAACGACCGTTCTT
Cupriavidus taiwanensis RALTA_A0402 -141 4.9 CTGAACGACCGTTCTT
Position: -47
Score: 5.5
Sequence: TTGCACGATCGTGCTA
Locus tag: Bxe_A3184
Bxe_A3184 -47 5.5 TTGCACGATCGTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: paaH1
Ortholog function: 3-hydroxybutyryl-CoA dehydrogenase, phenylacetic acid degradation
Ralstonia solanacearum GMI1000 RSc2013 -49 4.9 TCGCACGCTCGTGCTA
Ralstonia pickettii 12J Rpic_2168 -53 4.9 TCGCACGCTCGTGCTA
Ralstonia metallidurans CH34 Rmet_0974 -44 4.9 ACGTACGATCGTGCTA
Ralstonia eutropha JMP134 Reut_A1010 -43 4.9 ACGTACGATCGTGCTA
Ralstonia eutropha H16 H16_A1102 -43 4.9 ACGTACGATCGTGCTA
Cupriavidus taiwanensis RALTA_A1087 -31 4.9 ACGTACGATCGTGCTA
Position: -102
Score: 5.8
Sequence: TAGAACGATCGTGCTA
Locus tag: Bxe_A1362
Bxe_A1362 -102 5.8 TAGAACGATCGTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: etfD
Ortholog function: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Ralstonia solanacearum GMI1000 RSc1567 -120 5.6 TCGAACGACCGTTCAA
Ralstonia pickettii 12J Rpic_1986 -121 5.2 TCGAACGATCGTTCAG
Ralstonia metallidurans CH34 Rmet_1146 -243 5.4 AAGAACGGTCGTTCAA
Ralstonia eutropha JMP134 Reut_A1262 -211 5.1 AAGAACGACCGTTCCA
Ralstonia eutropha H16 H16_A1324 -248 5.1 AAGAACGACCGTTCCA
Cupriavidus taiwanensis RALTA_A1245 -288 5.1 AAGAACGACCGTTCCA
© 2009-2020 RegPrecise