Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Burkholderia xenovorans LB400

Reference regulog properties
Source regulog: LexA - Ralstonia
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia xenovorans LB400
Orthologous TF(s) Bxe_A2471
Regulated genes 3
Built upon 62 sites [see more]
Predicted regulatory interactions in Burkholderia xenovorans LB400
Locus tag Position Score Sequence
Position: -45
Score: 6
Sequence: TACTGTATAAAAATACAGTC
Position: -25
Score: 5.4
Sequence: ACCTGTTCATACATACAGTG
Locus tag: Bxe_A2471
Bxe_A2471 -45 6 TACTGTATAAAAATACAGTC
-25 5.4 ACCTGTTCATACATACAGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88)
Ralstonia solanacearum GMI1000 RSc1304 -44 5.3 CACTGTATAAAATCACAGCA
-25 5.4 ACCTGTTCAAATATACAGTG
Ralstonia pickettii 12J Rpic_1179 -44 5.3 CACTGTATAAAATCACAGCA
-25 5.4 ACCTGTTCAAATATACAGTG
Ralstonia metallidurans CH34 Rmet_1981 -63 5.4 TACTGTATAAAATCACAGCA
-43 6 TACTGTTTAAACATACAGTG
Ralstonia eutropha JMP134 Reut_A2008 -95 5 TACTGTATAAAATCACAGGC
-74 6 TACTGTTTAAACATACAGTG
Ralstonia eutropha H16 H16_A2281 -121 5.4 TACTGTATAAAATCACAGCA
-101 6 TACTGTTTAAACATACAGTG
Cupriavidus taiwanensis RALTA_A1825 -118 5.4 TACTGTATAAAATCACAGCA
-98 6 TACTGTTTAAACATACAGTG
Position: -112
Score: 5.9
Sequence: TACTGTTTTTTTATACAGTG
Locus tag: Bxe_A0671
Bxe_A0671 -112 5.9 TACTGTTTTTTTATACAGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Ralstonia solanacearum GMI1000 RSc0551 -180 5.5 CACTGGTTTTTTATACAGTA
Ralstonia pickettii 12J Rpic_0471 -172 5.5 CACTGGTTTTTTATACAGTA
Ralstonia metallidurans CH34 Rmet_0466 -171 6.1 TACTGTTTTTTTATACAGTA
Ralstonia eutropha JMP134 Reut_A0527 -194 6.1 TACTGTTTTTTTATACAGTA
Ralstonia eutropha H16 H16_A0544 -159 6.1 TACTGTTTTTTTATACAGTA
Cupriavidus taiwanensis RALTA_A0499 -159 6.1 TACTGTTTTTTTATACAGTA