Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LiuQ regulog to Burkholderia xenovorans LB400

Reference regulog properties
Source regulog: LiuQ - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia xenovorans LB400
Orthologous TF(s) Bxe_B0959, Bxe_A1393
Regulated genes 3
Built upon 14 sites [see more]
Predicted regulatory interactions in Burkholderia xenovorans LB400
Locus tag Position Score Sequence
Position: -186
Score: 5.5
Sequence: CTGAGTGATACTCAA
Locus tag: Bxe_B0960
Bxe_B0960 -186 5.5 CTGAGTGATACTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: liuA
Ortholog function: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Ralstonia eutropha JMP134 Reut_A1466 -167 5 TTGACCAACACTCAA
-59 5.3 TTGAGCTACGCTCAA
Ralstonia eutropha H16 H16_A1972 -234 5.3 TTGAGCTTTACTCAA
-59 5 TTGAGTAACACTCAC
Position: -126
Score: 5.5
Sequence: TTGAGTATCACTCAG
Locus tag: Bxe_B0959
Bxe_B0959 -126 5.5 TTGAGTATCACTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: liuQ
Ortholog function: Predicted branched-chain amino acid degradation regulator LiuQ, TetR family
Ralstonia metallidurans CH34 Rmet_0611 -212 5.6 TTGAGTAATACTCAA
-111 5.1 TTGAGTAACATTCAA
Ralstonia eutropha JMP134 Reut_A1468 -154 5.3 TTGAGCGTAGCTCAA
-46 5 TTGAGTGTTGGTCAA
Ralstonia eutropha H16 H16_A1970 -247 5 GTGAGTGTTACTCAA
-72 5.3 TTGAGTAAAGCTCAA