Propagation of Fur regulog to Cupriavidus taiwanensis
| Source regulog: | Fur - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Cupriavidus taiwanensis |
| Orthologous TF(s) | RALTA_B0107, RALTA_A2618 |
| Regulated genes | 13 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -56
Score: 5.2 Sequence: AATGGGAATTGTTATCATT
Locus tag: RALTA_A0266
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| RALTA_A0266 | -56 | 5.2 | AATGGGAATTGTTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bfd | ||||
| Ortholog function: Bacterioferritin-associated ferredoxin | ||||
| Ralstonia solanacearum GMI1000 | RSc0349 | -77 | 5 | AACAAGAATTGTTCTCATT |
| Ralstonia pickettii 12J | Rpic_0205 | -75 | 5 | AACAAGAATTGTTCTCATT |
| Ralstonia metallidurans CH34 | Rmet_0247 | -91 | 5.2 | AATGGGAATTGTTATCATT |
| Ralstonia eutropha JMP134 | Reut_A0298 | -1 | 5.2 | AAtGggAATTgTTATCaTT |
| Ralstonia eutropha H16 | H16_A0327 | -89 | 5.2 | AATGGGAATTGTTATCATT |
| Cupriavidus taiwanensis | RALTA_A0266 | -56 | 5.2 | AATGGGAATTGTTATCATT |
|
Position: -84
Score: 5.6 Sequence: ATTGAGAATCATTATCATT
Locus tag: RALTA_A0777
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| RALTA_A0777 | -84 | 5.6 | ATTGAGAATCATTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_A0796 | ||||
| Ortholog function: putative exported protein | ||||
| Ralstonia metallidurans CH34 | Rmet_0720 | -120 | 5 | ATTGATACTCATTATCATT |
| Ralstonia eutropha JMP134 | Reut_A2571 | -90 | 5.2 | ATTGCGAATCATTATCATT |
| Ralstonia eutropha H16 | H16_A0796 | -87 | 5.5 | ATTGAGAATCATTATTATT |
| Cupriavidus taiwanensis | RALTA_A0777 | -84 | 5.6 | ATTGAGAATCATTATCATT |
|
Position: -46
Score: 5.4 Sequence: AATGCGAATCATTATTATT
Locus tag: RALTA_A1365
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| RALTA_A1365 | -46 | 5.4 | AATGCGAATCATTATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_A1451 | ||||
| Ortholog function: putative transmembrane lipoprotein | ||||
| Ralstonia metallidurans CH34 | Rmet_1367 | -78 | 5.3 | AATACGAATCATTATTATT |
| Ralstonia eutropha H16 | H16_A1451 | -46 | 5 | AATGCGAATCATTACCATT |
| Cupriavidus taiwanensis | RALTA_A1365 | -46 | 5.4 | AATGCGAATCATTATTATT |
|
Position: -108
Score: 5.6 Sequence: AATGATAACAATTCTCATT
Locus tag: RALTA_A2040
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| RALTA_A2040 | -108 | 5.6 | AATGATAACAATTCTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemP | ||||
| Ortholog function: hemin uptake protein | ||||
| Ralstonia metallidurans CH34 | Rmet_2280 | -73 | 5.6 | AATGATAACAATTCTCATT |
| Ralstonia eutropha JMP134 | Reut_A2238 | -107 | 5.1 | AATGGTAATGGTTCTCATT |
| Ralstonia eutropha H16 | H16_A2535 | -81 | 5.6 | AATGATAACAATTCTCATT |
| Cupriavidus taiwanensis | RALTA_A2040 | -108 | 5.6 | AATGATAACAATTCTCATT |
|
Position: -92
Score: 4.7 Sequence: AATAGGAATAATTCGCAAT
Locus tag: RALTA_A2655
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| RALTA_A2655 | -92 | 4.7 | AATAGGAATAATTCGCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_A3182 | ||||
| Ortholog function: putative iron-regulated TonB-dependent transporter | ||||
| Ralstonia solanacearum GMI1000 | RS02469 | -153 | 5.1 | AATGGGAATTGTTCTCATT |
| Ralstonia pickettii 12J | Rpic_4266 | -100 | 5.1 | AATAGGAATTGTTCTCATT |
| Ralstonia eutropha JMP134 | Reut_A2878 | -51 | 5 | AATGATAATGCTTCGCATT |
| Ralstonia eutropha H16 | H16_A3182 | -153 | 4.7 | AATAGGAATAATTCGCAAT |
| Cupriavidus taiwanensis | RALTA_A2655 | -92 | 4.7 | AATAGGAATAATTCGCAAT |
|
Position: -83
Score: 5.2 Sequence: AATGAAAACGATTTTCATT
Locus tag: RALTA_B0077
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| RALTA_B0077 | -83 | 5.2 | AATGAAAACGATTTTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: Ferrous iron transport protein A | ||||
| Ralstonia solanacearum GMI1000 | RS03714 | -66 | 4.9 | AATGAAAACGATTCGCATT |
| Ralstonia pickettii 12J | Rpic_3949 | -61 | 4.9 | AATGAAAACGATTCGCATT |
| Ralstonia metallidurans CH34 | Rmet_5891 | -82 | 4.2 | ATCGAGAACGATTTCTATT |
| Ralstonia eutropha JMP134 | Reut_B5430 | -80 | 5.2 | AATGAAAACGATTTTCATT |
| Ralstonia eutropha H16 | H16_B0085 | -80 | 5.2 | AATGAAAACGATTTTCATT |
| Cupriavidus taiwanensis | RALTA_B0077 | -83 | 5.2 | AATGAAAACGATTTTCATT |
|
Position: -157
Score: 5.2 Sequence: AATGCGAATTGTTATCATT
Locus tag: RALTA_B0125
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| RALTA_B0125 | -157 | 5.2 | AATGCGAATTGTTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_B0117 | ||||
| Ortholog function: putative component of iron permease | ||||
| Cupriavidus taiwanensis | RALTA_B0125 | -157 | 5.2 | AATGCGAATTGTTATCATT |
|
Position: -70
Score: 5.1 Sequence: ATCGAGAATCATTATCATT
Locus tag: RALTA_B0897
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| RALTA_B0897 | -70 | 5.1 | ATCGAGAATCATTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aleB | ||||
| Ortholog function: putative iron-regulated TonB-dependent siderophore transporter | ||||
| Ralstonia solanacearum GMI1000 | RS00873 | -237 | 5.6 | AATGAGAATTATTCTCAAT |
| -53 | 5 | AATGAGAATCATTCTTGAT | ||
| Ralstonia metallidurans CH34 | Rmet_1118 | -56 | 4.6 | AATGATAATAGGTCGCATT |
| Ralstonia eutropha H16 | H16_B1489 | -80 | 4.8 | AATAGGAATCATTCTGATT |
| Cupriavidus taiwanensis | RALTA_B0897 | -70 | 5.1 | ATCGAGAATCATTATCATT |
|
Position: -84
Score: 4.2 Sequence: ATCACGAATCATTCCTATT
Locus tag: RALTA_B0923
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| RALTA_B0923 | -84 | 4.2 | ATCACGAATCATTCCTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuA1 | ||||
| Ortholog function: TonB-dependent siderophore transporter, hydroxomate-type | ||||
| Ralstonia eutropha H16 | H16_B1100 | -84 | 4.7 | ATTACGAATTATTCGCATT |
| Cupriavidus taiwanensis | RALTA_B0923 | -84 | 4.2 | ATCACGAATCATTCCTATT |
|
Position: -57
Score: 5.3 Sequence: AACAAGAATTATTCTCATT
Locus tag: RALTA_B1494
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| RALTA_B1494 | -57 | 5.3 | AACAAGAATTATTCTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuA3 | ||||
| Ortholog function: TonB-dependent siderophore transporter, hydroxamate-type | ||||
| Ralstonia eutropha H16 | H16_B1976 | -223 | 4.9 | AATACAAACCATTCTCATT |
| Cupriavidus taiwanensis | RALTA_B1494 | -57 | 5.3 | AACAAGAATTATTCTCATT |
|
Position: -153
Score: 5 Sequence: TATGAGAATGATTGTTATT
Locus tag: RALTA_B1811
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| RALTA_B1811 | -153 | 5 | TATGAGAATGATTGTTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fepA | ||||
| Ortholog function: TonB-dependent outer membrane iron transport protein | ||||
| Ralstonia eutropha H16 | H16_B2095 | -129 | 5 | TATGAGAATGATTGTTATT |
| Cupriavidus taiwanensis | RALTA_B1811 | -153 | 5 | TATGAGAATGATTGTTATT |
|
Position: -67
Score: 5 Sequence: AATGCGAATTATTCGCATT
Locus tag: RALTA_B2199
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| RALTA_B2199 | -67 | 5 | AATGCGAATTATTCGCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_B2476 | ||||
| Ortholog function: Putative TonB-dependent siderophore transporter | ||||
| Ralstonia metallidurans CH34 | Rmet_1819 | -54 | 4.6 | AATACGAATTGTTCGTATT |
| Ralstonia eutropha H16 | H16_B2476 | -73 | 5 | AATGCGAATTATTCGCATT |
| Cupriavidus taiwanensis | RALTA_B2199 | -67 | 5 | AATGCGAATTATTCGCATT |
|
Position: -101
Score: 4.2 Sequence: TTTGAGAATCACTCGCATT
Locus tag: RALTA_B2301
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| RALTA_B2301 | -101 | 4.2 | TTTGAGAATCACTCGCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fecA | ||||
| Ortholog function: TonB-dependent outer membrane transporter for Fe(III)-dicitrate | ||||
| Ralstonia metallidurans CH34 | Rmet_5806 | -66 | 4.7 | AATGCGAACCATTCGCATT |
| Ralstonia metallidurans CH34 | Rmet_5807 | -107 | 4.6 | ATTGCAAATCATTCCTATT |
| Cupriavidus taiwanensis | RALTA_B2301 | -101 | 4.2 | TTTGAGAATCACTCGCATT |