Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NsrR regulog to Cupriavidus taiwanensis

Reference regulog properties
Source regulog: NsrR - Ralstonia
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Cupriavidus taiwanensis
Orthologous TF(s) RALTA_A2987
Regulated genes 2
Built upon 23 sites [see more]
Predicted regulatory interactions in Cupriavidus taiwanensis
Locus tag Position Score Sequence
Position: -40
Score: 4.6
Sequence: CATGCATATTTTCTGCATG
Locus tag: RALTA_A2986
RALTA_A2986 -40 4.6 CATGCATATTTTCTGCATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmp
Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Ralstonia eutropha H16 H16_A3533 -41 5.6 CATGCATTTAATTTGCATG
Cupriavidus taiwanensis RALTA_A2986 -40 4.6 CATGCATATTTTCTGCATG
Ralstonia metallidurans CH34 Rmet_3382 32 6 CATGCATTTTACATGCATG
Ralstonia eutropha JMP134 Reut_A3219 -41 5.5 CATGCATTTTGTTTGCATG
Ralstonia solanacearum GMI1000 RS01706 -133 4.3 GTGGTATTTAATATGCATG
Ralstonia pickettii 12J Rpic_3609 -32 3.6 GTTGCATATTTCACGCATA
Position: -40
Score: 5.5
Sequence: CTTGCATCCTAGATGCATC
Locus tag: RALTA_A2987
RALTA_A2987 -40 5.5 CTTGCATCCTAGATGCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nsrR
Ortholog function: Nitrite-sensitive transcriptional repressor NsrR
Ralstonia eutropha H16 H16_A3534 -39 5.3 CTTGCATCCTGGATGCATC
Cupriavidus taiwanensis RALTA_A2987 -40 5.5 CTTGCATCCTAGATGCATC
Ralstonia metallidurans CH34 Rmet_3383 -25 5.5 CTTGCATTGGCGATGCACG
Ralstonia eutropha JMP134 Reut_A3220 -39 4.6 CTTGCATTTGAAATGCCGC