Propagation of NtrC regulog to Cupriavidus taiwanensis

Reference regulog properties
Source regulog:	NtrC - Ralstonia
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Phylum:	Proteobacteria/beta
Propagated regulon:
Target genome	Cupriavidus taiwanensis
Orthologous TF(s)	RALTA_A1877
Regulated genes	3

Built upon 28 sites [see more]

Predicted regulatory interactions in *Cupriavidus taiwanensis*
	Locus tag	Position	Score	Sequence
Position: -190 Score: 4.5 Sequence: TGCACCACAAGGGGGCG Locus tag: RALTA_A1879
	RALTA_A1879	-190	4.5	TGCACCACAAGGGGGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ntrZ
Ortholog function: Conserved hypothetical signal peptide protein
Ralstonia solanacearum GMI1000	RS02776	-334	5.1	CGCACTATGATGGTGCG
Ralstonia pickettii 12J	Rpic_1087	-346	4.7	TGCACCGTTTATGTGCG
Ralstonia metallidurans CH34	Rmet_2061	-193	4.4	TGCACCAGGAAGGGGCG
Ralstonia eutropha JMP134	Reut_A2056	-80	4.6	AGCACCATCAAGGGGCG
Ralstonia eutropha H16	H16_A2334	-95	4.7	TGCACCAGAAAGGGGCG
Cupriavidus taiwanensis	RALTA_A1879	-190	4.5	TGCACCACAAGGGGGCG

Position: -334 Score: 4.8 Sequence: CGCACTAATGCGGTGCG Position: -304 Score: 4.7 Sequence: TGCACCATGATGGTGTT Locus tag: RALTA_A1880
	RALTA_A1880	-334	4.8	CGCACTAATGCGGTGCG
		-304	4.7	TGCACCATGATGGTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA
Ortholog function: Glutamine synthetase type I (EC 6.3.1.2)
Ralstonia solanacearum GMI1000	RSc1258	-334	5.1	CGCACTATGATGGTGCG
Ralstonia pickettii 12J	Rpic_1086	-346	4.7	TGCACCGTTTATGTGCG
Ralstonia metallidurans CH34	Rmet_2062	-297	4.9	CGCACCGTTATGGTGTT
Ralstonia eutropha JMP134	Reut_A2057	-319	4.9	CGCACCGTTATGGTGTT
Ralstonia eutropha H16	H16_A2335	-295	4.7	TGCACCATTGTGGTGTT
Cupriavidus taiwanensis	RALTA_A1880	-334	4.8	CGCACTAATGCGGTGCG
		-304	4.7	TGCACCATGATGGTGTT

Position: -187 Score: 4.9 Sequence: CGCGCCATTTTGGCGCA Locus tag: RALTA_B1139
	RALTA_B1139	-187	4.9	CGCGCCATTTTGGCGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: amtB
Ortholog function: Ammonium transporter
Ralstonia pickettii 12J	Rpic_0087	-137	4.9	CGCACGACCATGGTGCG
Ralstonia metallidurans CH34	Rmet_4750	-185	4.5	TGCGCCATCACGGCGCA
Ralstonia eutropha JMP134	Reut_B4038	-232	4.7	TGCACCACTAAGGTTCA
		-91	4.6	TCCACCATGAAGGTGCA
Ralstonia eutropha H16	H16_B1234	-221	5.1	CGCACCATAACGGTTCA
		-188	4.9	CGCGCCATTTTGGCGCA
Cupriavidus taiwanensis	RALTA_B1139	-187	4.9	CGCGCCATTTTGGCGCA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NtrC regulog to Cupriavidus taiwanensis

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --