Propagation of NtrC regulog to Ralstonia pickettii 12D

Reference regulog properties
Source regulog:	NtrC - Ralstonia
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Phylum:	Proteobacteria/beta
Propagated regulon:
Target genome	Ralstonia pickettii 12D
Orthologous TF(s)	Rpic12D_1182
Regulated genes	2

Built upon 28 sites [see more]

Predicted regulatory interactions in *Ralstonia pickettii 12D*
	Locus tag	Position	Score	Sequence
Position: -239 Score: 5 Sequence: CGCACCACTACGGCGCA Locus tag: Rpic12D_0093
	Rpic12D_0093	-239	5	CGCACCACTACGGCGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: amtB
Ortholog function: Ammonium transporter
Ralstonia pickettii 12J	Rpic_0087	-137	4.9	CGCACGACCATGGTGCG
Ralstonia metallidurans CH34	Rmet_4750	-185	4.5	TGCGCCATCACGGCGCA
Ralstonia eutropha JMP134	Reut_B4038	-232	4.7	TGCACCACTAAGGTTCA
		-91	4.6	TCCACCATGAAGGTGCA
Ralstonia eutropha H16	H16_B1234	-221	5.1	CGCACCATAACGGTTCA
		-188	4.9	CGCGCCATTTTGGCGCA
Cupriavidus taiwanensis	RALTA_B1139	-187	4.9	CGCGCCATTTTGGCGCA

Position: -272 Score: 4.4 Sequence: TGCACCGAAAGCGTGCG Locus tag: Rpic12D_4275
	Rpic12D_4275	-272	4.4	TGCACCGAAAGCGTGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: narK
Ortholog function: Nitrate/nitrite antiporter
Ralstonia solanacearum GMI1000	RS03167	-258	4.8	TGCACCGAAACCGTGCA
Ralstonia pickettii 12J	Rpic_4163	-272	4.4	TGCACCGAAAGCGTGCG
Ralstonia metallidurans CH34	Rmet_4817	-284	5	CGCACCATTGCCGTGCG
Ralstonia eutropha JMP134	Reut_B4859	-271	4.2	CGCACCATGACTGTGCC

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --