Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NtrC regulog to Burkholderia dolosa AUO158

Reference regulog properties
Source regulog: NtrC - Ralstonia
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia dolosa AUO158
Orthologous TF(s) BdolA_01001251, BdolA_01001250
Regulated genes 3
Built upon 28 sites [see more]
Predicted regulatory interactions in Burkholderia dolosa AUO158
Locus tag Position Score Sequence
Position: -265
Score: 5.4
Locus tag: BdolA_01001248
BdolA_01001248 -265 5.4 TGCACCGTATCGGTGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA
Ortholog function: Glutamine synthetase type I (EC
Ralstonia solanacearum GMI1000 RSc1258 -334 5.1 CGCACTATGATGGTGCG
Ralstonia pickettii 12J Rpic_1086 -346 4.7 TGCACCGTTTATGTGCG
Ralstonia metallidurans CH34 Rmet_2062 -297 4.9 CGCACCGTTATGGTGTT
Ralstonia eutropha JMP134 Reut_A2057 -319 4.9 CGCACCGTTATGGTGTT
Ralstonia eutropha H16 H16_A2335 -295 4.7 TGCACCATTGTGGTGTT
Cupriavidus taiwanensis RALTA_A1880 -334 4.8 CGCACTAATGCGGTGCG
Position: -243
Score: 4.6
Locus tag: BdolA_01002203
BdolA_01002203 -243 4.6 CGCGCCAGATCGGTGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: amtB
Ortholog function: Ammonium transporter
Ralstonia pickettii 12J Rpic_0087 -137 4.9 CGCACGACCATGGTGCG
Ralstonia metallidurans CH34 Rmet_4750 -185 4.5 TGCGCCATCACGGCGCA
Ralstonia eutropha JMP134 Reut_B4038 -232 4.7 TGCACCACTAAGGTTCA
Ralstonia eutropha H16 H16_B1234 -221 5.1 CGCACCATAACGGTTCA
Cupriavidus taiwanensis RALTA_B1139 -187 4.9 CGCGCCATTTTGGCGCA
Position: -285
Score: 4.3
Locus tag: BdolA_01003764
BdolA_01003764 -285 4.3 CGCACCACATCTGTGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: narK
Ortholog function: Nitrate/nitrite antiporter
Ralstonia solanacearum GMI1000 RS03167 -258 4.8 TGCACCGAAACCGTGCA
Ralstonia pickettii 12J Rpic_4163 -272 4.4 TGCACCGAAAGCGTGCG
Ralstonia metallidurans CH34 Rmet_4817 -284 5 CGCACCATTGCCGTGCG
Ralstonia eutropha JMP134 Reut_B4859 -271 4.2 CGCACCATGACTGTGCC