Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NtrC regulog to Burkholderia cenocepacia MC0-3

Reference regulog properties
Source regulog: NtrC - Ralstonia
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia cenocepacia MC0-3
Orthologous TF(s) Bcenmc03_2165
Regulated genes 3
Built upon 28 sites [see more]
Predicted regulatory interactions in Burkholderia cenocepacia MC0-3
Locus tag Position Score Sequence
Position: -316
Score: 4.2
Sequence: CGCACCGCGATGCCGCA
Locus tag: Bcenmc03_5796
Bcenmc03_5796 -316 4.2 CGCACCGCGATGCCGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narK
Ortholog function: Nitrate/nitrite antiporter
Ralstonia solanacearum GMI1000 RS03167 -258 4.8 TGCACCGAAACCGTGCA
Ralstonia pickettii 12J Rpic_4163 -272 4.4 TGCACCGAAAGCGTGCG
Ralstonia metallidurans CH34 Rmet_4817 -284 5 CGCACCATTGCCGTGCG
Ralstonia eutropha JMP134 Reut_B4859 -271 4.2 CGCACCATGACTGTGCC
Position: -254
Score: 4.7
Sequence: CGCGCCAGATCGGTGCG
Locus tag: Bcenmc03_1175
Bcenmc03_1175 -254 4.7 CGCGCCAGATCGGTGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: amtB
Ortholog function: Ammonium transporter
Ralstonia pickettii 12J Rpic_0087 -137 4.9 CGCACGACCATGGTGCG
Ralstonia metallidurans CH34 Rmet_4750 -185 4.5 TGCGCCATCACGGCGCA
Ralstonia eutropha JMP134 Reut_B4038 -232 4.7 TGCACCACTAAGGTTCA
-91 4.6 TCCACCATGAAGGTGCA
Ralstonia eutropha H16 H16_B1234 -221 5.1 CGCACCATAACGGTTCA
-188 4.9 CGCGCCATTTTGGCGCA
Cupriavidus taiwanensis RALTA_B1139 -187 4.9 CGCGCCATTTTGGCGCA