Propagation of LexA regulog to Burkholderia glumae BGR1
| Source regulog: | LexA - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Burkholderia glumae BGR1 |
| Orthologous TF(s) | bglu_1g18740 |
| Regulated genes | 5 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -109
Score: 5.8 Sequence: AGCTGTATGAATATACAGTA
Locus tag: bglu_2g07270
|
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| bglu_2g07270 | -109 | 5.8 | AGCTGTATGAATATACAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uvrA | ||||
| Ortholog function: Excinuclease ABC subunit A | ||||
| Ralstonia metallidurans CH34 | Rmet_4549 | -150 | 6.1 | CACTGTATGTTCATACAGTA |
| Ralstonia eutropha JMP134 | Reut_B4240 | -160 | 5.6 | CACTGTACGGATATACAGTC |
| Ralstonia eutropha H16 | H16_B1571 | -72 | 5.7 | GACTGTATGGATGTACAGTG |
| Cupriavidus taiwanensis | RALTA_B1379 | -71 | 5.7 | GACTGTATGGATGTACAGTG |
|
Position: 15
Score: 5.5 Sequence: TACTGTATAAAAATACAGAT
Locus tag: bglu_1g18740
|
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| bglu_1g18740 | 15 | 5.5 | TACTGTATAAAAATACAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lexA | ||||
| Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88) | ||||
| Ralstonia solanacearum GMI1000 | RSc1304 | -44 | 5.3 | CACTGTATAAAATCACAGCA |
| -25 | 5.4 | ACCTGTTCAAATATACAGTG | ||
| Ralstonia pickettii 12J | Rpic_1179 | -44 | 5.3 | CACTGTATAAAATCACAGCA |
| -25 | 5.4 | ACCTGTTCAAATATACAGTG | ||
| Ralstonia metallidurans CH34 | Rmet_1981 | -63 | 5.4 | TACTGTATAAAATCACAGCA |
| -43 | 6 | TACTGTTTAAACATACAGTG | ||
| Ralstonia eutropha JMP134 | Reut_A2008 | -95 | 5 | TACTGTATAAAATCACAGGC |
| -74 | 6 | TACTGTTTAAACATACAGTG | ||
| Ralstonia eutropha H16 | H16_A2281 | -121 | 5.4 | TACTGTATAAAATCACAGCA |
| -101 | 6 | TACTGTTTAAACATACAGTG | ||
| Cupriavidus taiwanensis | RALTA_A1825 | -118 | 5.4 | TACTGTATAAAATCACAGCA |
| -98 | 6 | TACTGTTTAAACATACAGTG | ||
|
Position: -98
Score: 5.8 Sequence: CACTGTTTTTTTATACAGTG
Locus tag: bglu_1g29970
|
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| bglu_1g29970 | -98 | 5.8 | CACTGTTTTTTTATACAGTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: recA | ||||
| Ortholog function: Recombinase A | ||||
| Ralstonia solanacearum GMI1000 | RSc0551 | -180 | 5.5 | CACTGGTTTTTTATACAGTA |
| Ralstonia pickettii 12J | Rpic_0471 | -172 | 5.5 | CACTGGTTTTTTATACAGTA |
| Ralstonia metallidurans CH34 | Rmet_0466 | -171 | 6.1 | TACTGTTTTTTTATACAGTA |
| Ralstonia eutropha JMP134 | Reut_A0527 | -194 | 6.1 | TACTGTTTTTTTATACAGTA |
| Ralstonia eutropha H16 | H16_A0544 | -159 | 6.1 | TACTGTTTTTTTATACAGTA |
| Cupriavidus taiwanensis | RALTA_A0499 | -159 | 6.1 | TACTGTTTTTTTATACAGTA |
|
Position: -166
Score: 6.4 Sequence: GACTGTATATTTATACAGTA
Locus tag: bglu_4p0880
|
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| bglu_4p0880 | -166 | 6.4 | GACTGTATATTTATACAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: imuA | ||||
| Ortholog function: Predicted RecA/RadA recombinase | ||||
| Cupriavidus taiwanensis | pRALTA_0101 | -41 | 6.3 | AACTGTATAAATATACAGTA |