Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HypR regulog to Burkholderia ambifaria MC40-6

Reference regulog properties
Source regulog: HypR - Ralstonia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Proline and 4-hydrohyproline utilization
Effector: Proline; 4-hydroxyproline
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia ambifaria MC40-6
Orthologous TF(s) BamMC406_5881
Regulated genes 2
Built upon 2 sites [see more]
Predicted regulatory interactions in Burkholderia ambifaria MC40-6
Locus tag Position Score Sequence
Position: -207
Score: 4.9
Sequence: ATTGTATAAAAT
Locus tag: BamMC406_5868
BamMC406_5868 -207 4.9 ATTGTATAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hypD
Ortholog function: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
Ralstonia metallidurans CH34 Rmet_5097 -117 4.9 ATTTTATACAAT
Position: -80
Score: 4.9
Sequence: ATTGTATAAAAT
Locus tag: BamMC406_5869
BamMC406_5869 -80 4.9 ATTGTATAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: COG2271 (UhpC)
Ortholog function: Transporter, MFS superfamily
Ralstonia metallidurans CH34 Rmet_5098 -84 4.2 GTTGTATAAAAT