Propagation of PsrA regulog to Burkholderia ambifaria MC40-6
| Source regulog: | PsrA - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid degradation |
| Effector: | Oleate |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Burkholderia ambifaria MC40-6 |
| Orthologous TF(s) | BamMC406_1457 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -12
Score: 4 Sequence: AAGGAAACAGCCATGTCGAA
Locus tag: BamMC406_6294
|
||||
| BamMC406_6294 | -12 | 4 | AAGGAAACAGCCATGTCGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fabG | ||||
| Ortholog function: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) | ||||
| Ralstonia metallidurans CH34 | Rmet_2428 | -226 | 2.5 | CATCAAACGCGGGTATGATG |
| Ralstonia eutropha JMP134 | Reut_A2263 | -198 | 2.5 | GATCAAACGCGGGTATGATG |
| Ralstonia eutropha H16 | H16_A2567 | -200 | 2.5 | CATCAAACGCGGGTATGATG |
| Cupriavidus taiwanensis | RALTA_A2070 | -201 | 2.5 | CATCAAACGCGGGTATGATG |
|
Position: -74
Score: 6.3 Sequence: ATAAAAACGGCTGTTTGAAT
Locus tag: BamMC406_1457
|
||||
| BamMC406_1457 | -74 | 6.3 | ATAAAAACGGCTGTTTGAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psrA | ||||
| Ortholog function: Transcriptional regulator for fatty acid degradation PsrA, TetR family | ||||
| Ralstonia solanacearum GMI1000 | RS04928 | -122 | 4.6 | TTTAAAACATCCGTTCCTAA |
| Ralstonia pickettii 12J | Rpic_0418 | -121 | 4.5 | TTTCAAACGTCTGTTCCTAA |
| Ralstonia eutropha JMP134 | Reut_A3446 | -120 | 3.6 | ATTAGAGCAGGCATTCGAAT |
| Ralstonia eutropha H16 | H16_A3736 | -104 | 4 | CTTCGTACAGCTGTTTCAAG |
| Cupriavidus taiwanensis | RALTA_A3194 | -105 | 4 | CTTCGTACAGCTGTTTCAAG |