Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Fur regulog to Burkholderia ambifaria MC40-6

Reference regulog properties
Source regulog: Fur - Ralstonia
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia ambifaria MC40-6
Orthologous TF(s) BamMC406_0570
Regulated genes 5
Built upon 94 sites [see more]
Predicted regulatory interactions in Burkholderia ambifaria MC40-6
Locus tag Position Score Sequence
Position: -133
Score: 4.6
Sequence: AACAAGAACGCTTCTCATT
Locus tag: BamMC406_4712
BamMC406_4712 -133 4.6 AACAAGAACGCTTCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Reut_B4659
Ortholog function: TonB-dependent siderophore transporter
Ralstonia pickettii 12J Rpic_0101 -65 5.1 AACGATAACAATTCTCATT
Ralstonia eutropha JMP134 Reut_B4659 -180 4.7 ATTACGAATGATTCGTATT
Position: -179
Score: 4.9
Sequence: AATGATACCGATTCTCATT
Locus tag: BamMC406_5005
BamMC406_5005 -179 4.9 AATGATACCGATTCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Reut_A2876
Ortholog function: putative TonB-dependent siderophore transporter
Ralstonia pickettii 12J Rpic_3802 -136 4.8 ATTGAGAATCGTTGTCATT
Ralstonia metallidurans CH34 Rmet_3077 -42 4.2 AACGCGAATCGTTCGCATT
Ralstonia eutropha JMP134 Reut_A2876 -136 4.4 AACGCAAATCATTCGCATT
Position: -147
Score: 5.6
Sequence: ATTGATAATGATTCTCATT
Locus tag: BamMC406_5315
BamMC406_5315 -147 5.6 ATTGATAATGATTCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: RSp0244
Ortholog function: TonB-dependent outer-membrane hemin transporter
Ralstonia solanacearum GMI1000 RS03722 -223 5.5 ATTGATAATGATTCTTATT
-217 4.1 AATGATTCTTATTTGCATT
Position: -42
Score: 5.5
Sequence: AATGATAATAATTCGCATT
Locus tag: BamMC406_2115
BamMC406_2115 -42 5.5 AATGATAATAATTCGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: Bacterioferritin-associated ferredoxin
Ralstonia solanacearum GMI1000 RSc0349 -77 5 AACAAGAATTGTTCTCATT
Ralstonia pickettii 12J Rpic_0205 -75 5 AACAAGAATTGTTCTCATT
Ralstonia metallidurans CH34 Rmet_0247 -91 5.2 AATGGGAATTGTTATCATT
Ralstonia eutropha JMP134 Reut_A0298 -1 5.2 AAtGggAATTgTTATCaTT
Ralstonia eutropha H16 H16_A0327 -89 5.2 AATGGGAATTGTTATCATT
Cupriavidus taiwanensis RALTA_A0266 -56 5.2 AATGGGAATTGTTATCATT
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