Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NtrC regulog to Burkholderia ambifaria MC40-6

Reference regulog properties
Source regulog: NtrC - Ralstonia
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia ambifaria MC40-6
Orthologous TF(s) BamMC406_2057
Regulated genes 2
Built upon 28 sites [see more]
Predicted regulatory interactions in Burkholderia ambifaria MC40-6
Locus tag Position Score Sequence
Position: -242
Score: 5
Locus tag: BamMC406_2059
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA
Ortholog function: Glutamine synthetase type I (EC
Ralstonia solanacearum GMI1000 RSc1258 -334 5.1 CGCACTATGATGGTGCG
Ralstonia pickettii 12J Rpic_1086 -346 4.7 TGCACCGTTTATGTGCG
Ralstonia metallidurans CH34 Rmet_2062 -297 4.9 CGCACCGTTATGGTGTT
Ralstonia eutropha JMP134 Reut_A2057 -319 4.9 CGCACCGTTATGGTGTT
Ralstonia eutropha H16 H16_A2335 -295 4.7 TGCACCATTGTGGTGTT
Cupriavidus taiwanensis RALTA_A1880 -334 4.8 CGCACTAATGCGGTGCG