Propagation of RmgR regulog to Paenibacillus sp. JDR-2
| Source regulog: | RmgR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | AraC |
| Regulation mode: | activator |
| Biological process: | Rhamnogalacturonides utilization |
| Effector: | |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Paenibacillus sp. JDR-2 |
| Orthologous TF(s) | Pjdr2_1800 |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -141
Score: 6.7 Sequence: TCAATT-(13)-TCATTA
Position: -140
Score: 5.7 Sequence: CAATTT-(12)-TCATTA
Locus tag: Pjdr2_1802
|
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| Pjdr2_1802 | -141 | 6.7 | TCAATT-(13)-TCATTA | |
| -140 | 5.7 | CAATTT-(12)-TCATTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytcQ | ||||
| Ortholog function: Predicted unsaturated rhamnogalacturonyl ABC transporter, substrate-binding component | ||||
| Bacillus clausii KSM-K16 | ABC1144 | -174 | 5.3 | TCATTT-(13)-gCAaaT |
| Paenibacillus sp. JDR-2 | Pjdr2_1802 | -141 | 6.7 | TCAATT-(13)-TCATTA |