Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FadP regulog to Burkholderia cenocepacia J2315

Reference regulog properties
Source regulog: FadP - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia cenocepacia J2315
Orthologous TF(s) BCAL0883
Regulated genes 7
Built upon 85 sites [see more]
Predicted regulatory interactions in Burkholderia cenocepacia J2315
Locus tag Position Score Sequence
Position: -52
Score: 5.3
Sequence: TAGTACGGCCGTTCGA
Locus tag: BCAL0883
BCAL0883 -52 5.3 TAGTACGGCCGTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadP
Ortholog function: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Ralstonia solanacearum GMI1000 RS04423 -136 5.7 TTGAACGATCGTTCGA
Ralstonia pickettii 12J Rpic_0347 -136 5.6 TTGAACGACCGTTCGA
Ralstonia metallidurans CH34 Rmet_0384 -142 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha JMP134 Reut_A0445 -140 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha H16 H16_A0459 -143 4.9 CTGAACGACCGTTCTT
Cupriavidus taiwanensis RALTA_A0402 -141 4.9 CTGAACGACCGTTCTT
Position: -89
Score: 5.6
Sequence: TCGAACGACCGTGCTA
Locus tag: BCAL1333
BCAL1333 -89 5.6 TCGAACGACCGTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acdH3
Ortholog function: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Ralstonia solanacearum GMI1000 RS02949 -101 5.5 TTGAACGACCGTGCTA
Ralstonia eutropha JMP134 Reut_A1408 -203 5.5 TTGAACGACCGTGCTA
Ralstonia eutropha H16 H16_A1530 -214 5.5 TTGAACGACCGTGCTA
Cupriavidus taiwanensis RALTA_A1471 -218 5.5 TTGAACGACCGTGCTA
Position: -104
Score: 5.8
Sequence: TAGAACGATCGTGCTA
Locus tag: BCAL1468
BCAL1468 -104 5.8 TAGAACGATCGTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: etfD
Ortholog function: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Ralstonia solanacearum GMI1000 RSc1567 -120 5.6 TCGAACGACCGTTCAA
Ralstonia pickettii 12J Rpic_1986 -121 5.2 TCGAACGATCGTTCAG
Ralstonia metallidurans CH34 Rmet_1146 -243 5.4 AAGAACGGTCGTTCAA
Ralstonia eutropha JMP134 Reut_A1262 -211 5.1 AAGAACGACCGTTCCA
Ralstonia eutropha H16 H16_A1324 -248 5.1 AAGAACGACCGTTCCA
Cupriavidus taiwanensis RALTA_A1245 -288 5.1 AAGAACGACCGTTCCA
Position: -60
Score: 5.3
Sequence: TAGCACGATCGTTCAC
Locus tag: BCAL2328
BCAL2328 -60 5.3 TAGCACGATCGTTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: RSc2046
Ortholog function: conserved hypothetical protein, DUF1178
Ralstonia solanacearum GMI1000 RS03611 -63 5.5 TAGCACGACCGTTCAA
Ralstonia pickettii 12J Rpic_2198 -85 5.1 GCGAACGGTCGTGCGA
-63 5.2 TAGCACGACCGTTCAC
Ralstonia metallidurans CH34 Rmet_0943 -62 5.2 TAGCACGACCGTTCAC
Ralstonia eutropha JMP134 Reut_A0977 -64 5.2 TAGCACGACCGTTCAC
Ralstonia eutropha H16 H16_A1066 -87 5.3 CCGAACGGTCGTTCTA
-64 5.2 TAGCACGACCGTTCAC
Cupriavidus taiwanensis RALTA_A1050 -87 5.4 ACGAACGGTCGTTCTA
-64 5.2 TAGCACGACCGTTCAC
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