Propagation of NtrC regulog to Burkholderia cenocepacia J2315
| Source regulog: | NtrC - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Burkholderia cenocepacia J2315 |
| Orthologous TF(s) | BCAL2222 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -253
Score: 4.7 Sequence: CGCGCCAGATCGGTGCG
Locus tag: BCAL1084
|
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| BCAL1084 | -253 | 4.7 | CGCGCCAGATCGGTGCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: amtB | ||||
| Ortholog function: Ammonium transporter | ||||
| Ralstonia pickettii 12J | Rpic_0087 | -137 | 4.9 | CGCACGACCATGGTGCG |
| Ralstonia metallidurans CH34 | Rmet_4750 | -185 | 4.5 | TGCGCCATCACGGCGCA |
| Ralstonia eutropha JMP134 | Reut_B4038 | -232 | 4.7 | TGCACCACTAAGGTTCA |
| -91 | 4.6 | TCCACCATGAAGGTGCA | ||
| Ralstonia eutropha H16 | H16_B1234 | -221 | 5.1 | CGCACCATAACGGTTCA |
| -188 | 4.9 | CGCGCCATTTTGGCGCA | ||
| Cupriavidus taiwanensis | RALTA_B1139 | -187 | 4.9 | CGCGCCATTTTGGCGCA |
|
Position: -242
Score: 5 Sequence: TGCACCAAGGCGGTGCG
Locus tag: BCAL2224
|
||||
| BCAL2224 | -242 | 5 | TGCACCAAGGCGGTGCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnA | ||||
| Ortholog function: Glutamine synthetase type I (EC 6.3.1.2) | ||||
| Ralstonia solanacearum GMI1000 | RSc1258 | -334 | 5.1 | CGCACTATGATGGTGCG |
| Ralstonia pickettii 12J | Rpic_1086 | -346 | 4.7 | TGCACCGTTTATGTGCG |
| Ralstonia metallidurans CH34 | Rmet_2062 | -297 | 4.9 | CGCACCGTTATGGTGTT |
| Ralstonia eutropha JMP134 | Reut_A2057 | -319 | 4.9 | CGCACCGTTATGGTGTT |
| Ralstonia eutropha H16 | H16_A2335 | -295 | 4.7 | TGCACCATTGTGGTGTT |
| Cupriavidus taiwanensis | RALTA_A1880 | -334 | 4.8 | CGCACTAATGCGGTGCG |
| -304 | 4.7 | TGCACCATGATGGTGTT | ||
|
Position: -316
Score: 4.2 Sequence: CGCACCGCGATGCCGCA
Locus tag: BCAM1686
|
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| BCAM1686 | -316 | 4.2 | CGCACCGCGATGCCGCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: narK | ||||
| Ortholog function: Nitrate/nitrite antiporter | ||||
| Ralstonia solanacearum GMI1000 | RS03167 | -258 | 4.8 | TGCACCGAAACCGTGCA |
| Ralstonia pickettii 12J | Rpic_4163 | -272 | 4.4 | TGCACCGAAAGCGTGCG |
| Ralstonia metallidurans CH34 | Rmet_4817 | -284 | 5 | CGCACCATTGCCGTGCG |
| Ralstonia eutropha JMP134 | Reut_B4859 | -271 | 4.2 | CGCACCATGACTGTGCC |