Propagation of FadP regulog to Burkholderia cenocepacia HI2424
| Source regulog: | FadP - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | |
| Biological process: | Fatty acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Burkholderia cenocepacia HI2424 |
| Orthologous TF(s) | Bcen2424_2722 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -104
Score: 5.8 Sequence: TAGAACGATCGTGCTA
Locus tag: Bcen2424_1461
|
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| Bcen2424_1461 | -104 | 5.8 | TAGAACGATCGTGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: etfD | ||||
| Ortholog function: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) | ||||
| Ralstonia solanacearum GMI1000 | RSc1567 | -120 | 5.6 | TCGAACGACCGTTCAA |
| Ralstonia pickettii 12J | Rpic_1986 | -121 | 5.2 | TCGAACGATCGTTCAG |
| Ralstonia metallidurans CH34 | Rmet_1146 | -243 | 5.4 | AAGAACGGTCGTTCAA |
| Ralstonia eutropha JMP134 | Reut_A1262 | -211 | 5.1 | AAGAACGACCGTTCCA |
| Ralstonia eutropha H16 | H16_A1324 | -248 | 5.1 | AAGAACGACCGTTCCA |
| Cupriavidus taiwanensis | RALTA_A1245 | -288 | 5.1 | AAGAACGACCGTTCCA |
|
Position: -134
Score: 4.8 Sequence: AAGAACGTTCGTGCTA
Locus tag: Bcen2424_2227
|
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| Bcen2424_2227 | -134 | 4.8 | AAGAACGTTCGTGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: paaG4 | ||||
| Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17) | ||||
| Ralstonia solanacearum GMI1000 | RSc2014 | -49 | 4.9 | TCGCACGCTCGTGCTA |
| Ralstonia pickettii 12J | Rpic_2169 | -53 | 4.9 | TCGCACGCTCGTGCTA |
| Ralstonia metallidurans CH34 | Rmet_0973 | -44 | 4.9 | ACGTACGATCGTGCTA |
| Ralstonia eutropha JMP134 | Reut_A1009 | -43 | 4.9 | ACGTACGATCGTGCTA |
| Ralstonia eutropha H16 | H16_A1101 | -43 | 4.9 | ACGTACGATCGTGCTA |
| Cupriavidus taiwanensis | RALTA_A1086 | -31 | 4.9 | ACGTACGATCGTGCTA |
|
Position: -60
Score: 5.3 Sequence: TAGCACGATCGTTCAC
Locus tag: Bcen2424_2233
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| Bcen2424_2233 | -60 | 5.3 | TAGCACGATCGTTCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: RSc2046 | ||||
| Ortholog function: conserved hypothetical protein, DUF1178 | ||||
| Ralstonia solanacearum GMI1000 | RS03611 | -63 | 5.5 | TAGCACGACCGTTCAA |
| Ralstonia pickettii 12J | Rpic_2198 | -85 | 5.1 | GCGAACGGTCGTGCGA |
| -63 | 5.2 | TAGCACGACCGTTCAC | ||
| Ralstonia metallidurans CH34 | Rmet_0943 | -62 | 5.2 | TAGCACGACCGTTCAC |
| Ralstonia eutropha JMP134 | Reut_A0977 | -64 | 5.2 | TAGCACGACCGTTCAC |
| Ralstonia eutropha H16 | H16_A1066 | -87 | 5.3 | CCGAACGGTCGTTCTA |
| -64 | 5.2 | TAGCACGACCGTTCAC | ||
| Cupriavidus taiwanensis | RALTA_A1050 | -87 | 5.4 | ACGAACGGTCGTTCTA |
| -64 | 5.2 | TAGCACGACCGTTCAC | ||
|
Position: -52
Score: 5.3 Sequence: TAGTACGGCCGTTCGA
Locus tag: Bcen2424_2722
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| Bcen2424_2722 | -52 | 5.3 | TAGTACGGCCGTTCGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadP | ||||
| Ortholog function: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family | ||||
| Ralstonia solanacearum GMI1000 | RS04423 | -136 | 5.7 | TTGAACGATCGTTCGA |
| Ralstonia pickettii 12J | Rpic_0347 | -136 | 5.6 | TTGAACGACCGTTCGA |
| Ralstonia metallidurans CH34 | Rmet_0384 | -142 | 4.9 | CTGAACGACCGTTCTT |
| Ralstonia eutropha JMP134 | Reut_A0445 | -140 | 4.9 | CTGAACGACCGTTCTT |
| Ralstonia eutropha H16 | H16_A0459 | -143 | 4.9 | CTGAACGACCGTTCTT |
| Cupriavidus taiwanensis | RALTA_A0402 | -141 | 4.9 | CTGAACGACCGTTCTT |