Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FadP regulog to Burkholderia cenocepacia AU 1054

Reference regulog properties
Source regulog: FadP - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia cenocepacia AU 1054
Orthologous TF(s) Bcen_2110
Regulated genes 7
Built upon 85 sites [see more]
Predicted regulatory interactions in Burkholderia cenocepacia AU 1054
Locus tag Position Score Sequence
Position: -104
Score: 5.8
Sequence: TAGAACGATCGTGCTA
Locus tag: Bcen_0979
Bcen_0979 -104 5.8 TAGAACGATCGTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: etfD
Ortholog function: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Ralstonia solanacearum GMI1000 RSc1567 -120 5.6 TCGAACGACCGTTCAA
Ralstonia pickettii 12J Rpic_1986 -121 5.2 TCGAACGATCGTTCAG
Ralstonia metallidurans CH34 Rmet_1146 -243 5.4 AAGAACGGTCGTTCAA
Ralstonia eutropha JMP134 Reut_A1262 -211 5.1 AAGAACGACCGTTCCA
Ralstonia eutropha H16 H16_A1324 -248 5.1 AAGAACGACCGTTCCA
Cupriavidus taiwanensis RALTA_A1245 -288 5.1 AAGAACGACCGTTCCA
Position: -134
Score: 4.8
Sequence: AAGAACGTTCGTGCTA
Locus tag: Bcen_1615
Bcen_1615 -134 4.8 AAGAACGTTCGTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: paaG4
Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17)
Ralstonia solanacearum GMI1000 RSc2014 -49 4.9 TCGCACGCTCGTGCTA
Ralstonia pickettii 12J Rpic_2169 -53 4.9 TCGCACGCTCGTGCTA
Ralstonia metallidurans CH34 Rmet_0973 -44 4.9 ACGTACGATCGTGCTA
Ralstonia eutropha JMP134 Reut_A1009 -43 4.9 ACGTACGATCGTGCTA
Ralstonia eutropha H16 H16_A1101 -43 4.9 ACGTACGATCGTGCTA
Cupriavidus taiwanensis RALTA_A1086 -31 4.9 ACGTACGATCGTGCTA
Position: -60
Score: 5.3
Sequence: TAGCACGATCGTTCAC
Locus tag: Bcen_1621
Bcen_1621 -60 5.3 TAGCACGATCGTTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: RSc2046
Ortholog function: conserved hypothetical protein, DUF1178
Ralstonia solanacearum GMI1000 RS03611 -63 5.5 TAGCACGACCGTTCAA
Ralstonia pickettii 12J Rpic_2198 -85 5.1 GCGAACGGTCGTGCGA
-63 5.2 TAGCACGACCGTTCAC
Ralstonia metallidurans CH34 Rmet_0943 -62 5.2 TAGCACGACCGTTCAC
Ralstonia eutropha JMP134 Reut_A0977 -64 5.2 TAGCACGACCGTTCAC
Ralstonia eutropha H16 H16_A1066 -87 5.3 CCGAACGGTCGTTCTA
-64 5.2 TAGCACGACCGTTCAC
Cupriavidus taiwanensis RALTA_A1050 -87 5.4 ACGAACGGTCGTTCTA
-64 5.2 TAGCACGACCGTTCAC
Position: -52
Score: 5.3
Sequence: TAGTACGGCCGTTCGA
Locus tag: Bcen_2110
Bcen_2110 -52 5.3 TAGTACGGCCGTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadP
Ortholog function: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Ralstonia solanacearum GMI1000 RS04423 -136 5.7 TTGAACGATCGTTCGA
Ralstonia pickettii 12J Rpic_0347 -136 5.6 TTGAACGACCGTTCGA
Ralstonia metallidurans CH34 Rmet_0384 -142 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha JMP134 Reut_A0445 -140 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha H16 H16_A0459 -143 4.9 CTGAACGACCGTTCTT
Cupriavidus taiwanensis RALTA_A0402 -141 4.9 CTGAACGACCGTTCTT
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