Propagation of LiuQ regulog to Burkholderia cenocepacia AU 1054
| Source regulog: | LiuQ - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Burkholderia cenocepacia AU 1054 |
| Orthologous TF(s) | Bcen_3126 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -129
Score: 5.2 Sequence: CTGAGTTTCGCTCAA
Position: -28
Score: 5.3 Sequence: CTGAGTGATACTCAG
Locus tag: Bcen_3126
|
||||
| Bcen_3126 | -129 | 5.2 | CTGAGTTTCGCTCAA | |
| -28 | 5.3 | CTGAGTGATACTCAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: liuQ | ||||
| Ortholog function: Predicted branched-chain amino acid degradation regulator LiuQ, TetR family | ||||
| Ralstonia metallidurans CH34 | Rmet_0611 | -212 | 5.6 | TTGAGTAATACTCAA |
| -111 | 5.1 | TTGAGTAACATTCAA | ||
| Ralstonia eutropha JMP134 | Reut_A1468 | -154 | 5.3 | TTGAGCGTAGCTCAA |
| -46 | 5 | TTGAGTGTTGGTCAA | ||
| Ralstonia eutropha H16 | H16_A1970 | -247 | 5 | GTGAGTGTTACTCAA |
| -72 | 5.3 | TTGAGTAAAGCTCAA | ||
|
Position: -157
Score: 5.3 Sequence: CTGAGTATCACTCAG
Position: -56
Score: 5.2 Sequence: TTGAGCGAAACTCAG
Locus tag: Bcen_3127
|
||||
| Bcen_3127 | -157 | 5.3 | CTGAGTATCACTCAG | |
| -56 | 5.2 | TTGAGCGAAACTCAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: liuA | ||||
| Ortholog function: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) | ||||
| Ralstonia eutropha JMP134 | Reut_A1466 | -167 | 5 | TTGACCAACACTCAA |
| -59 | 5.3 | TTGAGCTACGCTCAA | ||
| Ralstonia eutropha H16 | H16_A1972 | -234 | 5.3 | TTGAGCTTTACTCAA |
| -59 | 5 | TTGAGTAACACTCAC | ||