Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ArgR regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: ArgR - Bacillales
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor (activator)
Biological process: Arginine biosynthesis; Arginine degradation
Effector: Arginine
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_2315
Regulated genes 2
Built upon 84 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -51
Score: 4.7
Sequence: CTGTATATTTATTCAA
Locus tag: Pjdr2_2204
Pjdr2_2204 -51 4.7 CTGTATATTTATTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Aflv_0223
Ortholog function: Acetyltransferase, GNAT family (EC 2.3.1.-)
Anoxybacillus flavithermus WK1 Aflv_0223 -64 4.6 TTGTATATTTATAAAA
Geobacillus kaustophilus HTA426 GK3284 -47 4.8 TTGTATATTTATAAAT
-41 4.8 ATTTATAAATATACAA
Bacillus cereus ATCC 14579 BC0849 -79 4.2 ATGTATTATTATATAA
-59 5.1 ATGAATTAAAATTCAT
-39 4.4 AGTTATAAATATTAAT
Paenibacillus sp. JDR-2 Pjdr2_2204 -51 4.7 CTGTATATTTATTCAA
Position: -148
Score: 4.8
Sequence: TTGTATTAATATGAAT
Locus tag: Pjdr2_5743
Pjdr2_5743 -148 4.8 TTGTATTAATATGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Bacillus subtilis subsp. subtilis str. 168 BSU11190 -63 5.1 ATTAATTTTTATTCAT
-54 4.5 AGGCATAAAAATTCAT
-44 4.5 ATTCATTTTTATAATT
Bacillus amyloliquefaciens FZB42 RBAM_011190 -88 4.4 ATGAAAAAATATTAAA
-61 5.1 ATTAATTTTTATTCAT
Bacillus pumilus SAFR-032 BPUM_1042 -184 4.2 TATTATATTTATGCAG
-96 4.3 ATGAAAAAAAATGAAA
-57 5 ATTAATTTTTATACAT
-53 4.5 ACGCATAAAAATGCAT
-43 4.5 ATGCATTTATATTACT
-33 4.4 ATTACTAATTATTCAA
Bacillus licheniformis DSM 13 BLi01206 -90 4.2 TTGAAAAAATATTAAA
-63 5.1 ATTAATTTTTATTCAT
Anoxybacillus flavithermus WK1 Aflv_2152 -54 4.5 TTTTATTTTTATGCAG
Geobacillus kaustophilus HTA426 GK0790 -82 4.4 ATTATTAAATATACAT
-73 4.4 CTTAATTTTTATTCTT
-63 4.2 ATTCTTGTTTATGCAT
-62 4.4 TTTTATTTTTATACAG
Bacillus halodurans C-125 BH2900 -96 4.1 ATATATAAAAATACAG
-76 4.7 ATTTATTTTTATTCAG
Bacillus clausii KSM-K16 ABC2558 -73 4.8 ATTTATTTTTATTCAA
-53 4.4 ATGAATTTTTATAACT
-33 4.5 TAGAATAAATATAAAT
Oceanobacillus iheyensis HTE831 OB1075 -110 4.3 TCGCATATTAATGCAT
-100 5.2 ATGCATAAATATTAAT
-86 4.4 ATGTATTTTTATAATT
-66 4.4 TTGCATAAACATACAA
Paenibacillus sp. JDR-2 Pjdr2_5743 -148 4.8 TTGTATTAATATGAAT
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