Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HrcA regulog to Ralstonia eutropha JMP134

Reference regulog properties
Source regulog: HrcA - Ralstonia
Regulator type: Transcription factor
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia eutropha JMP134
Orthologous TF(s) Reut_A1036
Regulated genes 2
Built upon 12 sites [see more]
Predicted regulatory interactions in Ralstonia eutropha JMP134
Locus tag Position Score Sequence
Position: -104
Score: 7.9
Locus tag: Reut_A0325
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpoH
Ortholog function: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
Ralstonia solanacearum GMI1000 RSc0374 -70 7.4 TTAGCACTCATCCAGCCGGAGTGCTAA
Ralstonia pickettii 12J Rpic_0230 -70 7.6 TTAGCACTCATCCGGTTGGAGTGCTAA
Ralstonia metallidurans CH34 Rmet_0272 -96 7.7 TTAGCACTCGTCCGGTTCGAGTGCTAA
Ralstonia eutropha JMP134 Reut_A0325 -104 7.9 TTAGCACTCACCCGGCTTGAGTGCTAA
Ralstonia eutropha H16 H16_A0354 -104 7.9 TTAGCACTCACCCGGCCTGAGTGCTAA
Cupriavidus taiwanensis RALTA_A0299 -108 7.7 TTAGCACTCACCCGGCCAGAGTGCTAA
Position: -130
Score: 7.8
Locus tag: Reut_A2657
Supported by regulated orthologs from reference regulons
Ortholog gene name: groS
Ortholog function: Heat shock protein 60 family co-chaperone GroES
Ralstonia solanacearum GMI1000 RSc0641 -117 7.2 TTGGCACTCGCCTGGAGGGAGTGCTAA
Ralstonia pickettii 12J Rpic_0578 -118 7.6 TTAGCACTCGCCGGGCAGGAGTGCTAA
Ralstonia metallidurans CH34 Rmet_0615 -118 7.6 TTAGCACTCGCTGGGGGAGAGTGCTAA
Ralstonia eutropha JMP134 Reut_A2657 -130 7.8 TTAGCACTCGCTGGGGGTGAGTGCTAA
Ralstonia eutropha H16 H16_A0705 -121 7.8 TTAGCACTCGTCAGGGGTGAGTGCTAA
Cupriavidus taiwanensis RALTA_A0685 -121 7.7 TTAGCACTCGTCAGGGGGGAGTGCTAA